CI01000016_01476236_01476607


Basic Information

Item Value
gene id CI01000016_01476236_01476607
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1476236 ~ 1476762 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_01476236_01476607.mRNA
ATGGAGGAGAGGAGACACAGACACAGACTTGTAGTTTCCTACAATCCTGATGCCTGGCAGAAAGTAACCCCTGGCAAAAGAGATATCAGCAGGGGAGCGCAGTCTTATCCCAGGAGTTGGAGAGGGGGCTCAAGGAACAAATCCTATTATGGCCCTACTCCATGGGACAAACAGACACTGAGCTTTAAGCAGGGCCCCTGGCTGAGACTGGCATTTCACTGTCTTTTACTCCAGAAGGTCCCACAACTCTACAGCAACCGTCGCATGTCAACCAAAGGTCCTGAGAATGACCTGCGAGATGGTGGTGAATGTGACCTCATAACCCTCGTAAACTTCACATTCCGTACGGACAACTTCTGGACATCTTACTGACACATTGTTGACTGATAAATCGATTTTTAGCTGATTTAAATGAGTTTTTCCCTACCTACACTACAAAAATGCCTGTTTATTTACACACAATGATGCATGTTTTAAATTTAATCTCTTTATTTCCTCATCAAATTCTTATTGAGTAAATTATAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_01476236_01476607.mRNA True 527 mRNA 0.43 1 1476236 1476762

Neighbor

gene id symbol gene type direction distance location
CI01000016_01408124_01408966 TMEM74 coding upstream 67071 1406636 ~ 1409165 (+)
CI01000016_01277792_01304615 NA coding upstream 171474 1276928 ~ 1304762 (+)
CI01000016_01253760_01273553 NA coding upstream 202283 1253406 ~ 1273953 (+)
CI01000016_01238151_01242924 GDF6, GDF6A coding upstream 233276 1237991 ~ 1242960 (+)
CI01000016_01217119_01220858 EBAG9 coding upstream 254299 1217119 ~ 1221937 (+)
CI01000016_01509959_01560806 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding downstream 33197 1509959 ~ 1561122 (+)
CI01000016_01563821_01567070 NA coding downstream 85636 1562398 ~ 1567529 (+)
CI01000016_01588035_01601276 RSPO2 coding downstream 110308 1587070 ~ 1601909 (+)
CI01000016_01656995_01657299 NA coding downstream 180233 1656995 ~ 1658390 (+)
CI01000016_01989129_01990437 NA coding downstream 512262 1989024 ~ 1990995 (+)
G93565 NA non-coding upstream 6881 1462117 ~ 1469355 (+)
G93567 NA non-coding upstream 14258 1461600 ~ 1461978 (+)
G93547 NA non-coding upstream 26642 1394698 ~ 1449594 (+)
G93598 NA non-coding upstream 26799 1421620 ~ 1449437 (+)
G93483 NA non-coding upstream 133438 1340452 ~ 1342798 (+)
G93624 NA non-coding downstream 19631 1496393 ~ 1554026 (+)
G93711 NA non-coding downstream 437035 1913797 ~ 1942317 (+)
G93780 NA non-coding downstream 491776 1968538 ~ 1978432 (+)
G93777 NA non-coding downstream 562827 2039589 ~ 2045283 (+)
G93794 NA non-coding downstream 617190 2093952 ~ 2094182 (+)
G93406 NA other upstream 548704 905400 ~ 927532 (+)
G95439 NA other downstream 2385413 3862175 ~ 3862305 (+)
G95648 NA other downstream 2795874 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3357796 4829592 ~ 4837457 (+)
G95792 NA other downstream 3743118 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3929107 5405791 ~ 5407963 (+)

Expression


Co-expression Network