CI01000016_01653014_01654553


Basic Information

Item Value
gene id CI01000016_01653014_01654553
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1652387 ~ 1654559 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_01653014_01654553.mRNA
AGAACCATGAATTATTTCTCGGAATTCATCGTATGTCTTGTAACTTTCGCTGTGGCGGAGTGTTTAAAGCATGATATTAGCGCTATCACTGGTGAAGATGCCGTGTTGCCATGTGCGGCGAAATCAAAGGACGGTGTCCAGTATCGCTCGGTGATATGGTACAAGGTTGCTGAAGGGCCTTCCCGAACGTTAACTGGTCTTGTAATGAAAAGACTAACTGAAAACAATGGCAAAGTGGAAAAATATAAAGGTGTCGAACGAGAGGTTGAGCTGCTTGAGAGCACAAAGAGCCTTATTCTGTCTAATGTAACTGCAGAAGACAGTGGAATATACAGCTGCTTTATGTCTGCTCCTCTTGGCCATCAGAACCAGGAAGGCGAAGTCGTTCTGAATGTTAATGAGTTTATTACAGCTGAGGAAATGGAATATAATAAAAGTGATAACCATAACACACTTTATGTTATGGCTTTCGCAGTCCTCGGTGTGGCACTCCTGATGTTTTGCATAAGCTACGTATTTACCAGAGACATGTTTACCACAGGTTTGTTTAAGAAGTGTATTCCAAAGCAACAAGAAGCTCTCGAAAGACTCTTTGCATCAAGGCAAGAACTTGATTGTCACCAAGCATGTGGATTGCAAGACTTTACCTGAAGTGTTTGTGTGATGGTAAACAAGAGTTCATAGGGCAGTGCTCAGTAGGACAAAGCTTCGTGCACAGGACACAGATAGTCGATAGAGCTCATGCTGAAGAAGACAACCGGCAGATACACAAGAAGTGGCATGTCACATGCTACTTAACCTACTTGATAAGCTGGTAGATGGTCACTCTACAAAGAGTGAGGAATGCAAGCGCAAAGGTTTCAGCATCATCAACATCTTTTGAAAACTGAATCTTTACATTATGAAACAATCAGTGAGACCAAGAGAAATGTTCTGCATTAGAATTGTGGTTGGTTGCTTGTTTGTGAGTGTGACCACCATGGAAGTGGAGAAGGACTGACCCAAATACAGAGCACGTTTGAATGCTATGCTCTGTGATCAATGTTATTGTCTGGCATGCTTACAGATTTTCTACTAAGTTCTCACAAGACAAATGGTAAATATTGTATTTTTTCAAATGATTTTTGAAATCATGTTTTCAATTCTGTCATTCTTATAGAAAAGCAAAAACTACCTCATATGATAATGGATTTATTTAAAAATTCATTTGTTTTATTTCTATTTTATCTTTATGATATGGAGTTATTGTATGTTAATGCATATTGAATATAGAATAAA

Function

NR:

description
Si:ch211-149p10.2 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_01653014_01654553.mRNA True 1278 mRNA 0.39 5 1652387 1654559

Neighbor

gene id symbol gene type direction distance location
CI01000016_01577710_01581289 NA coding downstream 70708 1576406 ~ 1581679 (-)
CI01000016_01476991_01494147 NA coding downstream 157393 1476837 ~ 1494994 (-)
CI01000016_01396291_01399075 TRHRA coding downstream 251433 1394715 ~ 1400954 (-)
CI01000016_01341525_01342959 ENY2, ENY2.L coding downstream 308829 1341347 ~ 1343558 (-)
CI01000016_01224759_01234682 NA coding downstream 417705 1224136 ~ 1234682 (-)
CI01000016_01659416_01671969 NA coding upstream 4415 1658974 ~ 1671969 (-)
CI01000016_01689633_01693021 NA coding upstream 34936 1689495 ~ 1693672 (-)
CI01000016_01835869_01947822 TSNARE1 coding upstream 181186 1835745 ~ 1947842 (-)
CI01000016_02120276_02136906 NA coding upstream 465597 2120156 ~ 2137185 (-)
CI01000016_02263634_02265929 MRAP2, MRAP2A coding upstream 608686 2263245 ~ 2265929 (-)
G94449 NA non-coding downstream 28385 1623032 ~ 1624002 (-)
G94434 NA non-coding downstream 84105 1568055 ~ 1568282 (-)
G94433 NA non-coding downstream 86736 1565320 ~ 1565651 (-)
G94364 NA non-coding downstream 88476 1563089 ~ 1563911 (-)
G94394 NA non-coding downstream 199985 1452175 ~ 1452402 (-)
G94510 NA non-coding upstream 78520 1733079 ~ 1737573 (-)
G94634 NA non-coding upstream 417905 2072464 ~ 2078409 (-)
G94674 NA non-coding upstream 495804 2150363 ~ 2150589 (-)
G94748 NA non-coding upstream 525695 2180254 ~ 2180460 (-)
G94786 NA other upstream 616277 2270836 ~ 2276275 (-)
G95070 NA other upstream 1330701 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 1981048 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 2211202 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 3258149 4918975 ~ 4922518 (-)

Expression


Co-expression Network