CI01000016_01989129_01990437


Basic Information

Item Value
gene id CI01000016_01989129_01990437
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1989024 ~ 1990995 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_01989129_01990437.mRNA
CTTTAAAGTGGTGGGGTGAAATAAGCTTTGTTTGGTGGACCGGCCTTGTGTAAATCTGCCTGTGACATTTTGATAGCTGGAGATGTACTGGAAAAAAAAGCAAATATGATTAGAGAGGAGGCCGAATTAAAAGCTGTCACTCAAACATTCCATTATCAAACCAAACGAGAGCGCCGGGTTCAGAATGGATGTGAGAAGAGAGGCCCAGATAACTTGGAGACAAAGAGAAACAGCAGAGGTGGAGAAAAGGCGAGGGATGGACTTGTGGCAAGTCTGCCACGGCTCTCTATCACTGGATGGGCATTGTACGCCCAGAGCACCCTCAGTCCCACATATCTACAAACACACTCGTGTGCTTGTTTCTCTAGAGCAGCCGTGAGGTCAGTAGGCTATAGACAGAAAAAGAAAGAGAGACAGAAAGACACAAAGTATGGGATGGGTTACATGTGGTTGAGTGAGATCAAGTCAAGAGTGCCATTTAAACGTAGGACATGTTATTCTGGATAAACAAAAAACAGAGTCATCCATCTAAGACAAAAACAGTTCAGATATCTTTTTTTTTTTGTGCGTCATAGAACTATGATGCAATGCTCCTGGTTATTGTTGTCCTTAGCAAACTAATTCCCCCTTTTGTCTCTCGCTGCAGATGTCCCCTATAGTCATTGGGTGAGAACTGACAGAGTGGGATTGTTAGTTCTGTTATGGAGCTGATGAGAGAAATACTGTGTCTGTGTGTGTATAAGAAGAAGCATGCAATGTTTGGCGTCAATGTCACCCTGTGGATGATGTGAGGTCATTTAGTTTCTCAGCTGCTGGGGTCAAGACCTTAGTTCTGCATTATGTGCTATCAGAGCTTTGTACAATAATACTGACCGAGTGGATGCTTTTAATTTTTAATTAGCCAGAGCGTGTCTTTTTAGGCTCTTTCCCAAATGGCAACCTCAGCCCTTGCGGTCTTCCTCTGAGTCTAAACATTGTCGCATGAGCTGTTGTGTAATAGTCCACTGTAGAAGGAAAGAAGGAAGAAAGGAAGGATGGATGAAATAAAGGAACTGGAAAAGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_01989129_01990437.mRNA True 1065 mRNA 0.43 3 1989024 1990995

Neighbor

gene id symbol gene type direction distance location
CI01000016_01656995_01657299 NA coding upstream 330634 1656995 ~ 1658390 (+)
CI01000016_01588035_01601276 RSPO2 coding upstream 387115 1587070 ~ 1601909 (+)
CI01000016_01563821_01567070 NA coding upstream 421495 1562398 ~ 1567529 (+)
CI01000016_01509959_01560806 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding upstream 427902 1509959 ~ 1561122 (+)
CI01000016_01476236_01476607 NA coding upstream 512262 1476236 ~ 1476762 (+)
CI01000016_02000795_02079453 ADGRB1, ADGRB1A coding downstream 9214 2000209 ~ 2080896 (+)
CI01000016_02220464_02221013 NA coding downstream 229469 2220464 ~ 2221030 (+)
CI01000016_02235073_02261683 CEP162 coding downstream 244078 2235073 ~ 2262308 (+)
CI01000016_02337039_02343109 POGZB coding downstream 346044 2337039 ~ 2343109 (+)
CI01000016_02355737_02362570 SELENBP1, SBP1 coding downstream 364742 2355737 ~ 2363246 (+)
G93780 NA non-coding upstream 10592 1968538 ~ 1978432 (+)
G93711 NA non-coding upstream 46707 1913797 ~ 1942317 (+)
G93624 NA non-coding upstream 434998 1496393 ~ 1554026 (+)
G93565 NA non-coding upstream 519669 1462117 ~ 1469355 (+)
G93567 NA non-coding upstream 527046 1461600 ~ 1461978 (+)
G93777 NA non-coding downstream 48594 2039589 ~ 2045283 (+)
G93794 NA non-coding downstream 102957 2093952 ~ 2094182 (+)
G93779 NA non-coding downstream 113911 2104906 ~ 2105133 (+)
G94696 NA non-coding downstream 208013 2199008 ~ 2271134 (+)
G93406 NA other upstream 1061492 905400 ~ 927532 (+)
G95439 NA other downstream 1871180 3862175 ~ 3862305 (+)
G95648 NA other downstream 2281641 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 2843563 4829592 ~ 4837457 (+)
G95792 NA other downstream 3228885 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3414874 5405791 ~ 5407963 (+)

Expression


Co-expression Network