CI01000016_02000795_02079453 (ADGRB1, ADGRB1A)


Basic Information

Item Value
gene id CI01000016_02000795_02079453
gene name ADGRB1, ADGRB1A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2000209 ~ 2080896 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02000795_02079453.mRNA
GCATAAAAAGCACTGTTTATTCTGTTCAAAAAACACCCACTCTTTCACTTGAAGACTTTTGCTCTGAGCATCCTGAAAACAGCTTATCTTGGACCAAACAGATATGTGCCATTGTGTGTGTGTGTCTGTGTAAGGCAATGTTTGAGGTCATGCTGAGATCAATTGGAGCTTTATCTGCCCATAAAAAACCAAACCACCTGTGCAGTCAGTCACATCCACGTATTTTGGTCTGTGGTTTTTTTTTTTTTTTTTTTTTTACTCTAGGCTGTCACTGGGACTCCAGCATGCAATCTGTAGTGAAAGAGGTTAAGGTTTAGGGGTTAGTCTTAGTCTGCAAACTCTTAAACCAAGGGTGTCCAAACTGAATCTGACTCATTGAACAGCAAGTTGACATTACTTCATGAAAACTTTTGTGAAACAGGTTTGTGAAACTTGAATGAATATCATAAGACAACATACAATATTGTATGTTTAATATACATAATAGCAATTTTCTATGGGGAACATTGCTGCAAGAACAATGCACAAACAAAGTTTTTAAGAGAAGAAAAATGTATACTGAATTATTTTAAATAATCCAGTCATAATGGGATTGCCCAGCTTGAGCTGCAAAAGGGGTATTTTAGCTCACTCAAATGTATATGCTATTTCAGCCATGATATCAAAATTTTTACGGAACTGTTCATCGTTGGTGCTGCTGATACCTCTTCTTCAACTGCTGCGGTTGGACATGCTCAACGCTGCCCCCTCTGGCCCGGAGTCTGACACCTGCTCCACACTGGTCCAGAGTCGCTTTTTTGGATTCTTCCTCTCGTCTTCGGTATTTCCCAGCACGCCCTGCTCCTGGACCCTGCAGAACCCCGACCCACGACGCTACACCATCTTCATCAAGGTCACAAAACCAACCAGAGACTGCATTCCCCGACAACACCGAACCTTCCAGTTTGACTCCTTCTTGGAGACGACACGAACCTTCCTTGGAATGGAGAGCTTCGACGAGGTGGTGAAGCTGTGTGATGCCTCTACCCACGTTGCCTTCCTGGAAGCTGGGAAACAATTCTTGCAGATCCGGAAAGGGCTGCCCAGAGCAGGTGCCGGCTCCAGGAATGGGGATGGGGAATTTAAGGTGGAGTATCTTGTGGTTGGGAAGCGTAACCCCAGCATGGCTGCCTGTCAAATGTTGTGCCAATGGTTGGAGGACTGCCTGACCTACAGTACCTCCAACCGGCCCTGTGGCATCATGCAGACACCATGCCAATGTTGGGACCAGCCTCCACCAGACAAAGAAACCAGTGGATGCTACAGAGATGGGGTCTACTTGGAGAACTGCATCCCTGTTGTGAAAGAAGGAACCGCTGACACAAGTGCATGGATGCCAATGACGAGTAGCATCCTCTGGGTGTCAGCACTTCCCATGTTTCGCTTTCCGTCACTGATCCACAGTCTGTGTTTTAATGCATGTGGCTGGAGTGGGTGGGGCAACTGGGCGGAGTGCAGCAGTGAATGTGGGGGCGGAGTCCAGACGCGCAAACGCACCTGTCAATCACCTCCTGAGGAGGCGTACCTGTGCGAGGGTGTTCTGGAAGAAGGTCGTCCCTGCAACGCTCAGTCGTGCATTGGCTACAGGCAGTATTCCTCAAAAGGCAAGGGTTTAAGTCCAGTGAAATACAAAGGAATGCAAGAGGCCATGCTTGGTAAGGGCGTCACTGACCAAGTTAGTGTGAATGTGACTGTAGCAAAGGCAGACTTGGCACTCGTAGCCAATCCCTGCGCTCGGTGGACAGCCGTAAACGAGAGGACTCTGATAAGACCCGCAGTGGACAGCAGTCTTCCCAAACAGTGGATCCTCCGTCGGGTGAGGAGTGGTCTGCGTGGAGCGTGTGTTCGGCCACGTGCGGTGAGGGCTGGCAGAGCCGCACACGCTTCTGCGTCTCCGTGTCGTACAGTACGCAATGCAGCGGGCCGCTGCGCGAACAGAGACCCTGCAATAACACTGCTGTGTGTCCAGGTAAGCACAGCCCACCTCAGGCCTCTCCTCACCCCCACCATCTTCCTTATCCACCTCCCATCACCAGTCCCACCTCCACTTAGGTCCATTAGCTTTGCCAATTCACCTTCCAGTCGCTGCCCACCTGAGGCTAACTCTTCCTGGGCTTCCATGTACGGCTACTCCCCACTCAATCCTGGATTCTGGAGAGCCGTGGTGCGTTTTTCTCTCTATAAATCATACCCTAGCCGCTCTGATTGCAGTGCACGGGGCATGGGACGAGTGGTCTCCATGGAGCTTGTGTTCTTCAACGTGCGGACGTGGCTACAGGGACCGCACTCGCTCCTGCAAACCACCACAGTTCGGAGGAAACCCCTAATATTCTTCAGTTTCTTCTTCAAAGTTCATGTCTTTTCCTCTGTAGTGGATGGAGTGTGGAATGAGTGGTCCAGCTGGAGCTCTTGTTCCTCGTCCTGTTCGAATGGAACAATGCAGCGCACTCGGGAATGTAACGGGCCCTCGTATGGTGGCCTAGAGTGTCAGGGCGAGTGGCGTCAGACACGTGACTGCTTCCTCAGGGAGTGTCCTGTGGATGGCCAATGGCAACTCTGGAGCTCTTGGGCTGGTTGTACCAAAACATGTGGTGGAGGAAGCCAGCAGAGACAAAGGGTGTGTTACGGGCCCTTTTTTGGAGGGGAGCCATGCCCAGGGGACAGAGAGGAAGTTAGGCGTTGCAATGAGAAGAGATGTCCAGAGCCGCATGAGATTTGTGACGAGGAGAATTTCTCTAACGTAGTGTGGAAGAAAACACCTGCAGGGGACACGGCGGCTGTCCGCTGCCCTCCAAATGCTGTAGGACTAATTCTTCGGCGATGTTCGTTGGACGATGAGGGCATTGCATACTGGGAGAACCCGACGTACATGAAGTGTGTCTCAAATGATTACCGAAGTATCCAAACAATGACCAGAGATCATCTTTCCAAGGCTCAACGAGGGCTTGTGGGAGACGGGGTCTCTGAAGTCATGACCAAGTTGAGGGTGACGTCCAGTGATGGAACAAGCTACAGCGGAGACCTTCTGGCTATCATAGATGTACTGAAAAACATGACGGAGATATTTAGGAGGTCCTACTACAGCCCCAGTAATGCAGACATGAGGAATTTTGTGCAGTCAGTGAGTAACTTACTGATGGAGGAAAACAGGGACAGGTGGGAGGAAGCACAACTGCTGGGGCCCAATGTTAAGGAGCTTTTTCGTCTAGTGGAGGACTTTGTGGACGTCATCAGTCTCCGCATGAAGGACTTCCAGGATACTTATGAGGTCACCGACAATCTGGGTCAGTTTCTGCTGACATTTAGCTCAGTTTACACCCCTGCAATAATGTCAGAGGATGATGTGTTGAGTATTCACAAGCGGCCTGTCGCGGGAAATGCAGATATCACTTTCCCAATGAAGGGATGGAGGGGGATGGTGGACTGGGCTCGCAACTCTGAGGACAAAGTCAGAGTGGCTAAAAACATCCTGGTCACTGGAAAACCAGTGTACATTCCTCTAGTACTCCGTGTTATACATAAATGCCCCCTCAGGTCTCATCTGTTCCCATTATTGTGGCTTTGGCATATTAGTCGGAGGGAAAGAGGGTTGGGCGAGCAAAAACTCGATTCCCCTGAGGGAGCTCAAAACTGTCATGCCCCCAACCCCTGTCCCCCTCCATCAGTCTGTGTTCTTGTCCATGGGACCTCAGCTGCAGCCCTGGAGCTGTGGCCTCTGTCTGCCGCCTGGCACCCCCTACAGACTCTCTCTCTTTCTCCCCCTTACCGCGCATGCCAGAGGTTCTGCTGGGTACTGTTCTCTGACGGTGATGCAGTAAATAGCACAGTGCTGAACTCCAAGATGATCTCTGTGACAATCAAACCCACTCCCAATTCTCTCTCAACTCCACTGGAGATTGAGTTCTCACACCTTTACAATGGTACCACAAACCAAACCTGCATTTCCTGGGATGAGAATGACAGCTCGTCGTTGCTGGGCTCCTGGTCTGCGCGAGGCTGTAGAGCCGTGCCCGTCGACTCCAGCACAACCAAATGCTTGTGTGACAGACTCTCCACCTTCGCCATTTTAGCACGCCTCAATCCCGATGTGATGTTTCAGATTGGCTGCTACAAGAACAGAAGTCACTGTTGTGACACTGTTTTGATTTGGGAAACCAAGCGAAAAAGGGACATCATAATAAAACAGAATTATGATCTCAGCATTACACACAGGCTATGCCTTCTCGCTCCAGACCCCCACTGCTATGCTGCTAATTATTCCTGCAGCTCCACTTGCCACCTCAAAATGGCCCATCCAACGGCCCCTCCGCTGGCAACTAGCGTCCTACAGCTTCAGAATGATAAAGAGCCAGAGAAACACTTCTCTTCCTCTCGTTCCCTCCCACATTCTGAGTCTGAATGTACAAACATGGATAAGTCCCAGCTTCCATCTGTGACTCTGATCGTGGGCTGCGGGGTGTCGTCCCTTACCCTGCTTCTCCTCATCATCATCTATGTGTCTGTTTGGAGGTATATCCGCTCAGAACGCTCTGTCATCCTCATCAACTTTTGTCTGTCCATCATCTCCTCCAATGCTCTCATACTTATTGGACAGACCCAGACACGGAACAAGGTTGTTTGTACTCTTGTGGCTGCATTTCTGCACTTCTTCTTCCTGTCCTCTTTCTGTTGGGTTCTCACGGAGGCGTGGCAGTCTTACATGGCTGTGACTGGCCGTCTTAGAAACCGCATCATACGCAAACGTTTCCTCTGCCTTGGTTGGGGTTTACCTGCTCTCGTTGTAGCAATTTCTGTTGGATTCACCAAGGCAAAGGGATATGGCACTGTTAACTACTCCTGCGTTGTACTTCCATTGCTGGCTCTCACTTGGATGTCAGCGGTCCTGGCCATCACTGACCGCCGCTCAGCCTTGTTTCAGATTCTTTTTGCCGTCTTTGACTCTCTCGAGGGCTTTGTTATCGTGATGGTGCATTGCATCCTACGCAGAGAGGTCCAAGAGGCAGTAAAGTGTCGCGTTGTTGATCGTCAAGAAGATGGAAACGGTGACTCTGGTGGATCTTTCCAGAACGGCCATGCTCAGCTGATGACTGATTTTGAAAAGGATGTCGACATTGCTTGCCGATCAGGCACCCTGAAGCGTTCCTCCCAACAAGGCGAGGAAAAGGTAGCTTCACAGCAGATCACAGTACAGAAAGGCTCCAACTTCAACACCCTTCCTGCCAGCATGGCAAAGGTCCACCTGCAAAATGTTGCCGATTACGCCAGCCACACTCTCACCATGCGCCGCGACAAAGGCGGCATTGCCGGGGTCAGCACCGAGCTACCCGGAGCCAAATCTATTTATATCTGTGACGGCGAGCTCTTCAAGCAGCTGGACGGAGCTCCGGGAGACAGCGGCGGTCTTGAAGGCGGAGGAGGAGGAGGGTCGGGCCAGGGTTATGTGCTCTTGCCCAACAACAACAACACCCTTAGGCCCTCGAAAGGTGGCAAGGAGGACCAAGCCACCAAGTACAACATCAGCATCGAACAGTTACCCCAGACCAGGCTCATCCACCTGGCCAACCCCGCTGGCACTGATCCCGTGCCAGGCTTTGGGCTAAAGAGCTTGCCCACCGACAGAGTCAGCGTTTCCTGTTCGGAGAGGGACTCCCCGGGGCAGACAGTGCAAAACATCTCCAGCGAATCCCAAATGACATGTGAGCAAGGGGACTCTGGGAACTCCGGCATAATGTCTAAGAGTGAGACCATCTCCACACTGTCTATGAGCTCCTTGGAGAGACGAAAATCACGCTATGCAGAGCTGGACTTTGAGAAGATCATGCATACACGGAAGCGCCACCAGGACATGTTCCAGGACTTAAACAGGAAGCTGCAGCATGCAGAGAAGGACAGAGATTCTCCCCCAGTGGATGGGAAGCCTGGGAAGAGATGGAGTGTGTCGTCAGGAGGCAGCGATAAAACCAACCTTAGTGACAAGCAGCAGACCCCCAGTAAGCGGGCGTGGGAGGGCATCAGGAAGACCCACTCCCCACCATCATGGGTGCGTAAGGAGCTGGAGCCCCTACAGGCTTCTCCTCTGGAGATGCAAGCGGTGGAGTGGGAGAAGGCCAGCGCCACCATCCCTCTGGTGGGCCAAGAGATCATGGACCTGCAGACGGAGGTCTGAAAGACCCCCAGAGCATACAGAGAAACAGAACAAACTCTACTCGCAGGGAAAAAAAGGATAAGGAGATGGAATAATATTTGAGCAAGAGTGCGGGCAAAAAAAGTATGCAAGAAAGACACTGAAAGAGAGTGAAAGCAACATGGCTGTGCAATTTTTATTTGTGTTGTTTTTTTTGTTTTTTGTTTCTTTGTAATCCTGGAATGGCCTTTTCCTTAATGTCAAAGCGAATCATAACACTTTCGAAAATCCAGGTCTGAGCCTGTTGCTATGGTAATGAGCTGGCACTACCAAGAACGACTGAACTGGGCAAGTTAAATGGTGACCCGGGATGTTGCCATGGGAACATTGGGAGTGACTGACTAAAGGGAAGGACTGGAATTCAGGCTAAGAGCAGATGAGCCTTAGTGAGTGGCCTTCAATTTCTTACACCTCTGGATACATATTAGTGATCATGTCACATTTAAGAGCGTTATGGAAGAGAGTGACGTATCGCTACGACAGAAATCTTTCAAACTGCCCGGCAGGAATCAGGTGTGCTACACGTCATTCAAAATCAAATTCTTGAGTATTCTTAGTATTATTATCATCGTTGTTGATCAATGTGACACATGCGTATGCTTGGGGCACAAGAGGCGACGTGAATGCCCAAAGCCATCTGCATATGACTGTTAATCTGTCTCAAACGCCCTCCTGAACCAGTACAGCCCACAACTTAGCCACTGTGCTGTCCCATACACCGCACCAACCTGCGGATCCTTCGAAAGTCGGTCAATACCGAAGTGACATCAGTGTGAGATTCAGTTTGGAAGCAGGTCGAGGTACACGAGAACGGACACGTTTTCATTCGCTTGATGTTTTCATCAGAATCACTGGAGCTGAGAGACCTGAAACAAACTGCTGTGTCTCAGAATATGTGCAGAATCAAGTTTGAAAGAGAAAACGGAGATGAATATGAATATATAAATATATATTATAAATAGTATTATATATGAAACTGCAGAGGGGTGTTATTCTCTGGTTAGATTGTGGTCGCACACAGAGAAAGCACAAGACTCACTCCTCAGAGTCCTGTTGTACAGCATTGTAATTATTTCCAGAAGAGTTCTACAAAATGAATTTTAGCCTATAAATATCTTTCTTACTGTGCTTGGGGACTATTGTTATCATTATTATAGATATCATTGCGATTCTGAGATCCCCCACCCAACTCTCATCGGGTTACTGGACTTTATGAGTGTTCTGTAACATCATGTAACAGTGTGTATTTCGGTATCACTGACTGTCACTCCAGATGATACGTACTTGCCTGAATTCTCCACCATGAACCCCCTGCCCTCCTCCTCCTCCTCCCCCTGCCTTTCCACAATTCCTTTTTTAATTTCACTGGGGTTTCTTTGTTATTGTACAGTTTTCAGAGCACAAAATGAATGTGTCATATTTCTA

Function

symbol description
adgrb1a Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and engulfment of apoptotic cell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway; cell surface receptor signaling pathway; and negative regulation of angiogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite and postsynaptic density. Predicted to be integral component of plasma membrane. Is expressed in muscle; nervous system; and testis. Human ortholog(s) of this gene implicated in glioblastoma. Orthologous to human ADGRB1 (adhesion G protein-coupled receptor B1).
adgrb1 Enables G protein-coupled receptor activity. Involved in several processes, including engulfment of apoptotic cell; negative regulation of endothelial cell migration; and positive regulation of reactive oxygen species biosynthetic process. Located in extracellular space; perinuclear region of cytoplasm; and plasma membrane. Implicated in glioblastoma. Biomarker of carcinoma (multiple); gastrointestinal system cancer (multiple); invasive ductal carcinoma; and malignant astrocytoma (multiple).

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K04596 ADGRB1, BAI1; adhesion G protein-coupled receptor B1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02000795_02079453.mRNA True 7648 mRNA 0.50 33 2000209 2080896

Neighbor

gene id symbol gene type direction distance location
CI01000016_01989129_01990437 NA coding upstream 9214 1989024 ~ 1990995 (+)
CI01000016_01656995_01657299 NA coding upstream 341819 1656995 ~ 1658390 (+)
CI01000016_01588035_01601276 RSPO2 coding upstream 398300 1587070 ~ 1601909 (+)
CI01000016_01563821_01567070 NA coding upstream 432680 1562398 ~ 1567529 (+)
CI01000016_01509959_01560806 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding upstream 439087 1509959 ~ 1561122 (+)
CI01000016_02220464_02221013 NA coding downstream 139568 2220464 ~ 2221030 (+)
CI01000016_02235073_02261683 CEP162 coding downstream 154177 2235073 ~ 2262308 (+)
CI01000016_02337039_02343109 POGZB coding downstream 256143 2337039 ~ 2343109 (+)
CI01000016_02355737_02362570 SELENBP1, SBP1 coding downstream 274841 2355737 ~ 2363246 (+)
CI01000016_02367430_02368661 PI4KB coding downstream 286534 2367430 ~ 2368687 (+)
G93780 NA non-coding upstream 21777 1968538 ~ 1978432 (+)
G93711 NA non-coding upstream 57892 1913797 ~ 1942317 (+)
G93624 NA non-coding upstream 446183 1496393 ~ 1554026 (+)
G93565 NA non-coding upstream 530854 1462117 ~ 1469355 (+)
G93567 NA non-coding upstream 538231 1461600 ~ 1461978 (+)
G93794 NA non-coding downstream 13056 2093952 ~ 2094182 (+)
G93779 NA non-coding downstream 24010 2104906 ~ 2105133 (+)
G94696 NA non-coding downstream 118112 2199008 ~ 2271134 (+)
G94726 NA non-coding downstream 249630 2330526 ~ 2333592 (+)
G93406 NA other upstream 1072677 905400 ~ 927532 (+)
G95439 NA other downstream 1781279 3862175 ~ 3862305 (+)
G95648 NA other downstream 2191740 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 2753662 4829592 ~ 4837457 (+)
G95792 NA other downstream 3138984 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3324973 5405791 ~ 5407963 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location