CI01000016_02328065_02334778


Basic Information

Item Value
gene id CI01000016_02328065_02334778
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2327812 ~ 2335736 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02328065_02334778.mRNA
AGATAGTGTCTGGATTTTATTCAACACATTGCTGGTGTTTTGCAGATAAACTGTCAAGACCATCATAGACTGGTCTTTTCTGAACTCAATTCATGATTTTAAATTATTGATCACTTAAAATATCTCCCATATGAAAATATTGGCTAAATATGTGCATATATACTTCACTTACATGTACAAAGCACCGATAAATAGGTTAGGAACCAAAAACCTGTACTTTTTCAGAACCAGTTCCATTTTTAAAAGATACTGGAAACGAATGATTTCGAAAAAAAAAAGTTACTGGAAACGAATGAGATTCGGTTTCATTAACGGTTCTCAAACGTGCGTCTTTCCGCCAATGTGGACGGAACATCACACTGCAGTGTTTACTGCAGTACTATTCAGATTCACTGCAAAGCCTCTACTGGATATACAGCACGAAACGAGTGGTCCGATGTCCGATTCACAAACAAACGACTCTTATGAGTCGGTTCTTTTTAGTGCATCAGGCGACCAGTATGTAGCCCCACTACCGAACAAATGACTCTTCTGAACCGATTCTTTTTAGTGTATCAAAAGCATTATGACTCAGAAGGAGAGGTTAACTGACTGAATCAATAACTTTACTGTTTTATGTTGTATTTTATTTTAACATAAATAATTAATTTCAAAATATCCACCGCAAAATGTCCCAGGCAGGCCTGTTGTACTCTCAGCTCTGAATATTATTAAAACCACTGAATTTATATTCATGCAAGAAACTTATTTTCTTATTGTGATGCTGAGATAAACGTTTCATAATACATTGAAATCTTCTGCTAAATGATGAGACGCGTGTAATCAGCCAGTTGGCTAGCGGACAGCAGGGTAGGCCACTAAGCTGTTGTTGTTGTTGCTTAATATAGCATTCTGCACAGGACACAATGTAACATACCAGGGTTATTCTTCATTTTGTACACCTGCTACATGAGAGGTGATGGATCGAGTCACATCATCTGATCGAGTGAACTATGGCGCTGTCCTCGCGCTGGCGGCGATCAGCTTTATGCTGCTGCGAAAATGGATAGCTGGTGGTGTCTGCAAAAGCTGTGCTCGTTTGGATGGAAAAACAGTTGTGATCACTGGTGCCAACACAGGGATTGGCAAGGAAACTGCAAGAGATATGGCTCGTAGAGGGGCTCGGGTAATCATGGCCTGCCGTGACCTGACACGTGCTGAGAGTGCTGCCGAATATATTCGTCGCTCCACAGGAAATGGCAATGTAGTCATCAGACACTTAAATCTAGCCTCTCTCTATTCTGTCCGAGAATTTGCCAAAGAGTTCATAGCCACAGAAGAACGACTGGATATACTCATCAACAATGCAGGTGTGATGATGTGTCCAAAGTGGATCACAGAGGATGGCTTTGAGACACAGCTGGCTGTCAATCACTTGGGACATTTTCTTCTGACCAATCTACTATTAGGAATGCTAAAGAGATCCTCCCCCAGCCGCGTAGTGAATGTGTCCAGTGTTGCACATGTTGGTGGTAAGATTGAATTTGATGACCTTTTCTTTGACAAAAGGCCTTATAGTCCTTTGGTCAGCTATAAACAGAGTAAGCTGGCCAATGTGCTTTTCTCCAAAGAACTTGCACGAAGAACGAAAGGAGTGATTCGAACAGAGCTGAATCGCCATATTCTCTTATGGTACCCCATGCTGAAGACTATACTGTCTTTGCCCAGTATGCTGCTGATGAAAACTCCCTGGCAGGGCGCACAGACCTCCATCTACTGCGCTGTCACCGAAGGCTTAGAGAGGAAGTCTGGCTGCTACTTCAGTGATTGTGCTGAAAAATACCCTGCTCCAGAAGGAAAAGATGATGCAGTGGCAAGAAGGTTGTGGGAGGAAAGTGCTCGACTGGTCGGACTAAACAACCAGCACTGACACTCTTCCTGATTGCAAGCGCTCCCCCTAGTGGTGATACCTGTGACCCAAAACTTTATAGTTAGCAGAACCACAGAAAGGAAGTCATGGCACAGCTAGTGCCAAGGCAAATTACATGATTTGCATCGGGTCGGGAGATGCATATTTGTCAGCATTGTGTGTGTGTGTGATTCTTGGAATAGGATTTTCAAGAAAAAAACATAGATGTGTGGCTGTGTTTTCTTTGAAATTGATCACATTCTTATAAATTAAA

Function

NR:

description
LOC407663 protein, partial

GO:

id name namespace
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02328065_02334778.mRNA True 2162 mRNA 0.42 7 2327812 2335736

Neighbor

gene id symbol gene type direction distance location
CI01000016_02288848_02311105 PLEKHO1B coding downstream 16707 2287297 ~ 2311105 (-)
CI01000016_02263634_02265929 MRAP2, MRAP2A coding downstream 61883 2263245 ~ 2265929 (-)
CI01000016_02120276_02136906 NA coding downstream 190627 2120156 ~ 2137185 (-)
CI01000016_01835869_01947822 TSNARE1 coding downstream 379970 1835745 ~ 1947842 (-)
CI01000016_01689633_01693021 NA coding downstream 634140 1689495 ~ 1693672 (-)
CI01000016_02467451_02477544 NA coding upstream 131715 2467451 ~ 2477544 (-)
CI01000016_02568824_02575674 DECR1 coding upstream 232874 2568610 ~ 2575674 (-)
CI01000016_02589744_02622875 NA coding upstream 253739 2589475 ~ 2622875 (-)
CI01000016_02679833_02695963 SH3BP5B, SH3BP5 coding upstream 342802 2678538 ~ 2695963 (-)
CI01000016_02802780_02815803 NA coding upstream 466863 2802599 ~ 2815803 (-)
G94768 NA non-coding downstream 78140 2242223 ~ 2249672 (-)
G94751 NA non-coding downstream 130317 2197265 ~ 2197495 (-)
G94748 NA non-coding downstream 147352 2180254 ~ 2180460 (-)
G94674 NA non-coding downstream 177223 2150363 ~ 2150589 (-)
G94634 NA non-coding downstream 249403 2072464 ~ 2078409 (-)
G94796 NA non-coding upstream 97456 2433192 ~ 2446161 (-)
G95091 NA non-coding upstream 185985 2521721 ~ 2522003 (-)
G95100 NA non-coding upstream 192291 2528027 ~ 2537970 (-)
G95102 NA non-coding upstream 205847 2541583 ~ 2541802 (-)
G95103 NA non-coding upstream 206237 2541973 ~ 2542218 (-)
G94786 NA other downstream 51537 2270836 ~ 2276275 (-)
G95070 NA other upstream 649524 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 1299871 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 1530025 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 2576972 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 2989783 5325519 ~ 5332874 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location