CI01000016_02589744_02622875


Basic Information

Item Value
gene id CI01000016_02589744_02622875
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2589475 ~ 2622875 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02589744_02622875.mRNA
GCTTTCGGGACGCGCTTAGACAATGGGGAAGGCACAGGCATTTCTTTCTGTTTTATTCATTGCATCATGTTTCCTTGTAAGCACTGCACAGCAAACAGTTCTAGCAGCATCGGTACTCGAGACTTCCGGGAGGTTAAGATGTTCATGCACACTTTTGTGGATGGTTTGGATATTGACAGTAAAAAAGTACAGATTGGCCTTGCTCAATTCAGCACCGATACCCACGAAGAGTTTCTGTTGGGGAAGTATGCAAACAAAGCAGAGCTAATTAAGAAGATAGATAACCTTCCATACCGAACAGGAGGCACGTATATGGGAAAAGCCATGGATACCCTTAGGGAAAGTTATTTCACTAAAGAGGGTGGAAGCCGTATCAATGAAAATGTGCCTCAGATTGTTATGGTGATCACAGATGGAGACTCAGTCGATGATATAAAGGGACCTGCCAGAGATCTGCAACAGAAGGGTATTATTATCTTTGCTATTGGTGTCGGTCCCACCAATAAGACTGAGTTGAAGGCTATAGCCAGCAGCCCACCTGAGCGTTTTGTGGTTAATATCGACAATTACCAAGCACTGCAAGGACTGACAACCACCATGAAAGAGACAGTCTGTATCTTGATGAGGGATCAGGGGAAAGCTCTTGCCCCAAAGTTTGCTGATGTATTTGTCCTAGTAGATAGTTCGGCCCAGATGAAGACAGATCAGATAAGGGAACTTCTCACCCTACTGGTTGAGCAGCTCGAAGTGGGCGATGCATCTCATAAGATCGCGCTGGCTCAGTTTGGCGAGGATGTCGTCAACCATTTTCTGTTCAGTGACTACCAAGTCAAGGAAGAAGCCATCGAGTACATAAATCGGTTCGAGCCCAGGCCCAATGGAGAGCGAAAATTAGGAAAAGCCATTGATTTTGTTCGCGATAATATTCTTTACACGGCGTCTGGCAGCAGAATTGATAAAGGCTACCAGCAGTATCTGCTGGTGCTGAGAACAGGGAACTCATATGACTCTCCTGTGAGGGCCATAGAAACAATGATGGATGAGGATGTGACCATTATTGATATCAGATTCGAAGCAGATTTAAAATACCTGTTACCTACTATACATATGTTCCAGATTGACCAGAATATTGCTGATGTTGCTTCAGACATCACAAAAATGATTGAGGAAAAAGAAATTTTCAATGTTACAGGAGACTGCACATCAGCCCAAGTGGCGGATATTGTGTTTATTGTGGACGAATCGGGTAGTATCACCCCAAGCAACTTTGAACTGATGAAACACTTTCTCAAACACACAATTCGTGGTCTAGAGGTGAACTCTGACAGTGTGAGGGTGGGAATGGTACTTTACAATAACACACCCAGTGCTCAATTCTACCTGGACACATTTGTCAACAAGAGTGAAATTCTGAACTATGTTCAAATCATACCATACAGAGGCGGAGGAACCGCAACAGGTGCAGCCCTGAAGTTTGCCAAGGACAATCTCTTTACTAAGAACAGGGGCAGCAGGAAAGATCTTGGTGTTAAGCAGATTGCTGTTGTCATCACTGATGGCAAGTCACAAGATGAAGTCACCAACTCAGCTTCTGAGCTGAGGCGCTCGGGAGTCACTGTATATGCCCTTGGGGTGAAGGATGCTGATGTGGAGGAGCTCATAAACATTGCATCCCACCCTAAAAGGCAGTTTGTGTACAATGTGGAAAGTTTTCAGATGCTTAGATCACTGGAGAAAAGCCTCAGAAAGAGCCTTTGTAAGGATGTGATCAGTAGAAGTTTTGACAAGAAAGATAGATTTCTCCTAAAACAAGGATGTGTGAACACAGAGGAAGCAGACATTTATTTCTTGTTGGACCACTCTGTCAGCACTCGTGCCGACTTTGAAGATGTGAAGAAATTTATCATAGGCTTCCTGCAGTTATTCAACATTGGACCAGATCACGTACGCGTGGGAGTTGCTAAAGTCGCCCATGATCCTACTCTACAATTCAGCCTGACAGAGCACAAAAACAGAGCCTCTTTAGAAGCAGCTGTGAATAACATCATTCAACCCAATGGAGGCACAGAGACAGGCAAAGCACTAACTTATGTGGCCGATCTTTTCAATCAGGCTAAAGTGTCCCGTCCGGCTAAGGTGCAGGAGATTCTCATTGTCATTACTGATAAGAAATCCCAAGATGACGTGAGCGGACCAGCGGCAGAGCTGAAGATTCAAGGTGTTTCAGTCTATGCCATTGGAGTCAAGGATGCCAGCCAGGAAGAGCTCTTGAAGATGACGATTGATGAAAAAAAAAAATTCTATGTGCCCAACTATGATGGCCTGAATTCCATCAAGAGTGAAATTGTCACAGATATTTGCTCACAAGAGGCCTGCAAGAACAGGGTGGCCGATATCATGTTTTTGGTTGATGGTTCTTCTAGCATTCACAGCGATGACTTTCTGTTAATGAAGACTTTTATTACCAAAGTTGTAAATGGTACCGTTATCGGAGAAGATAATGTGCACATTGGCGTGGTTCAGTTTAGCGATAATCCAAAGAATGAATTTGCCCTGAATGAGTACTATGACAAAGGTAAAGTAGAGGATGAGATTAAGAGCATTACACAGATAACAGGGAACACATACACAGGAAAAGCACTCTCGTTCATTTCAAAGTATTTCGATGCACCCGGCGGTCGGCCTGATGTTCCACAGTTCCTCATAGTTATCACAGATGGGGAAGCTCATGATACTGTCGCCATGCCTGCCAAGGCCATCAGAGACAAGGGTGTCACCATCTTCTCAATAGGTGTGGGCAGGGTAAACACCACACAGTTGTGGGAAATCAGTGGAACTCAAGATAAAGTGTACGTGGAGAGGAATTTTGATGCACTTAAGTCCATAGAAAAAAACCTCCAGTTCAAGCTCTGCAGCTCTGACACAGGTTGTCCGAGCAAACAGTTGGCAGATGTGATCTTCTTGGTGCAGTGCACCAGACGGATTCCTCCTCAAGATTTTGAAAACATTAAAAACTTTTTAATTTCCGTGGTGAACAGCACACAGATTGGGGACAGTCTAGTTCGCTTTGGTGTTATTGTCTACTCAGACACTCAGAATCAGTTCTCTTTAAACCAGCACAACAGTAAACGTCAGGTACTGGAGGCCATAAATACCTTGAAGTCCCCAACTGGAAACAAAGACACAGCAAAAGCTCTTGCATACTCGCTTGCTTATTTCAATGATGCAAAAGGTGGGCGCCCGAAACGAGGCATCCCTCAAATGCTATTCGTGATCACGGACGGTGATGCTAGAGACCGAGAAAACCTACCTGCAAGGGCTGATGAGTTTGTAGCCAACCATATAAATGTGTATGGAATTGGAGTGGCCAGAGCTCAAGATAGTGAGCTGGAGATGATTACCAAGAACAAAAACAAAATCTTCCATGTTAACAATTACAAGGGCCTTCAAGATCTGCAAAAGAACATCTCAGGTGTGCTCTGCGCTGCAACCAAACCAGAATGCAAGAACGAGGTAGCTGACCTGGTGTTTCTGATTGATGGATCTACAAGCATCACCAATGAGTCATGGAATATTATGATTATGTTCTTGCTAAATATTGTGAACAACCTCCGTATTACTCCAGAATTTATCAGAATCGGTGTAGCCCAGTTCAGCGACTCATATCAGACAGAGTTCTTCTTGAATAAGTATAAAGATGTAGATGGTGTGAAGTCAGCAATTCGACAAATCAGTCAAATTGAAGGAAGTACATACATTGGAGAAGCTCTGCGTAAAGTTGTGGAATTCTTCCAGGAAAGCAAAGGGAGTCGCAAACAGAGACGTGTACCACAGAATCTCGTACTCATCACTGACGGCGTTTCAGCGGACGAAGTGAAAACAGCAGCTGATGATCTCCGACGCTCCCAAATTAATGTTTTTGTGATTGGAATTGGGGATTACTCGAAGCAACAGCTCAGCTATATTGCCGGGTCACAGGATAGGTTATTCGAGGTGAAGGACTTCAGCTACCTTGATCTGGAAACAGCACCATTTGTTGATTCCTTTTGTGGTCAACAACCAAGTTGTACTGTTGATATTGGCATCGGATTTGATAACTCCCGCACCAGTTCAAGTTATCGCTCAATATTAACAGACCAGAAAAAGCTGCAGGCCTACCTGCCTGAGATCGTCCGCTACATTTCAGTTGTGCACAAGTTGTGCTGTATCAACCAACCAACCCTCAATACCAATGTAGGCTTCCGATTGGTTGATGCTGATGGAAGGATGCTGGATGATTATTCCTTCGAAGAGTACAATGATGGCGTGGTACAAAAAGTGATGGCACTGCAGACTTCCAAATCTCTGAAATTCAACACCCAGCTTCTAAGCTCTTTTGAGGAGAAGTTCAGAGCTTCCAATTCTTACGTAAAGGTGCTGATAATCTTTACAGATGGGTTGGATGAGCCTGTTGATGACCTTCTGGGTGCCATCGAAAACCTCAAGACGAGTGGTGTAAAAGCACTGCTGACTGTGGCGCTGGATGGATTTAAAAACACTGCTGACCTGCAGAGACTGGAGTTCGGGCGAGGGATGCACTACAAGAAGCTTCTCTCTATCGGCATGCAGAATGTGGCCAGTGTCATGCAGAAAGAGATTGGGTCACCTGGACTGAGCGGGCTTCCTGGTTACCCTGGAGAAGAAGGAGGACCTGGTGAGAGAGGGCTTCCTGGTTTGAATGGAACTCGAGGACATCAGGGATGCAGTGGAAGAAGAGGTGTAAAGGGTGGCAGAGGTTACAGAGGCGATGATGGAGAGGAAGGAGAAAATGGTTTAAATGGGATAGATGGTGAACAGGGAGATTCAGGACTGGACAACAACAGCCGCGGTCCTAAAGGTGACGTCGGCAGTCCAGGCATAACGGGTGAACCAGGTTTAGATGGTCTTCCAGGCCAAATTGGTGATAATGGCAGACCAGGTCCTAATGGCAGAAGAGGCTCAGCGGGTGTACCGGGTCCCAGAGGGTCTTCAGGAGAACGAGGACAACAAGGACTCCCTGGGGGCTCAGGTCCACAGGGTGCTTTCGGTCCGCCTGGTCCGGTTGGGCAGAAAGGTTATCTTGGTCTACCTGGACCTCAGGGATCTCCTGGCTTTCCAGGAAGGCCGGGAACTAAAGGAAGCCTTGGGTCCAGGGGACAGAAGGGTGAACTGGGCTCTAAAGGAGTAAATGGAGGTGGTGGTCCAAAAGGCAACAGGGGAAGAGGGGGCAATGCTGGCAGGGCAGGACCACCTGGAGATCCTGGCAGTGATGGGATGCCTGGACACAGGGATTGTCAACTGATATCATATGTTCGAGACAACTGTTATAAAATAAAATGCCCTGCCTACCTCACTGATCTTGTGATTGGCATGGACATGTCTGAAGATGTGACTTCTCAAGGCTTTGAACGCATGCGTTCTGTAGTCCTGAGACTGCTGGACAATATCAATGTTGCAGAGACCACCTGCCCGACGGGGGCCCGCGTGGCTGTGGTCTCCTACAGCTCCTTCACCAGATACTTGATCCGCTTCAATGACTATCAGCGCAAGAATCAGCTTATTGAAGCGGTGAATAACATCGCCTGGGAACGCTCTTCAAATCGGCGTAACATAGGCGCTGCCATGCGGTTCGTGGGGAGGAACGTCCTGAAGCGTGTGCGAAAGGGTGTCCTGATGAGGAAAGTAGTGATCTTCCTCTCTGCTGGAGAGTCTCAGGATTCGACCTCCCTCAACACGGCCATTCTAGAGTACAAAGCGCTGAACATTAAACTCGGGGTCATCGCACTGAGGAATATCCCTACTATTAGAAAAGCTTTTGAGGCAGATGAAACCCAGAGTTTTATCTTCACTGTGCTGGGTAGATTGCAAGACCAGAGTACTATTCTCAGTAAGATCCAGAGTTGTGTTATCTGCTTTGATCCCTGCAGACCATCTAGAGAATGTGATGGCACCAACCTGGCACCTGCTCCTCAGGAGTTAGACATGGACTTGGCGGTGATTGTGGATGGCTCCCGTAGCATCCTGGCTGATGAATATGAGGGTGTGAAAGAGGTGCTCGGCAGTGTGCTCGATCAGATTGTTGTGAGCAGCCGACCCAGCGGGGTCGACAGACAAGCAAGAGTGGCCGTCTACCAGCAGAGCTCCACATACAGTGAAGCCCAGTCTGCTGTGAAAGTGATATTTGGCTTCCAACAGTTCAGTGATCGCAGTCTAATGAAGAGAAGCATCTACCAGGATCTAAAGCAAACCGGAGGCTCTTCCAGACTCGGCCTTGCGTTGGAACAGGCCGTAATGCAGGGCATCCTCACGGCTCCTAAGGGTCGCAAGAACAAGATGGTACTGGCCATCATTGGGGAGGAGACGACATCTCAGGACAGAGCAAAGCTGGAGTTGGTCTCCAGGATGGCGAAGTGCGAGGGTGTTGTTTTCTTCACCCTGACGGTGGGTGACCACATCAGTGTTACTCAGGTGGAAGAGCTTGCCAGCTATCCTGTAGAACAGCACATCATTCACCTAGGCCACTTGAAACATGGAGAGCAGGAGTACACGCAGCGCTTCATGAGGACGTTCTTCCACATTCTGAGCAAGAATGTGAACTCCTACCCTCATCCATCACTCCAGAGTCAGTGTAGTAATTTTCAAGGTCAAGGTCAGCCTATTGAGTACGAGGCTGCAGAGAGACCCGTGTACAGTGTTCCTGTGCCATCCGCTGAATACCCAAATGTAGTGGTGGAAGAGGAAATGGAGGAAGAAAACACTGCACAGGAGGAGACTGAGGGTCTCTGTCACCTAAACATTGACCGTGGCACCTTCTGTGGTAAATATATGCAGCGATGGTATTATAATGAAGCAGCTGGTGCATGTTTACCCTTCTGGTACGGGGGCTGTGACGGTAACAGTAACCGTTTTAGTTCAGAAAAGGAGTGCCTTCAGACCTGTGGCAAACAAAATCGTAAAATAATCCTGCAGGCAAAAGAGGGAACAGCATTATTTGATGATGTGTGCCGCATGAAACAGGATGAGGGTTCCTGCACTAACTATGTTTTGAGCTGGTACTATAACATCCAGCAGAATGAATGCATTCAATTCTGGTTTGGAGGATGTGGAGGAAACAAAAACAGGTTTGACACACAGAAGGATTGTGAAGCCCTTTGTCTAAGGGACATTTAACCTGGATGACTCTCCAAATGGCACTTTTTATTTTTTACATTTGAATGAATGTTCAGCATTTTTCAGAACAAAGGTGCACTCTCGCATTTAGCAATCATTTTCACAAAGCTAGAAAACTGTATTTGTGCAGGTTTTTACTACAAAAAAAAGCCAAGAATTACCCACCAGCAGCCCAATGCAAAAGCAAACAAGTACTTTTTATTTTTTGTTTGTGGTACTTTTATGAAGTTATACATCAGCTAAATCACACTGTACGTGTGTAGATTAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02589744_02622875.mRNA True 7457 mRNA 0.46 32 2589475 2622875

Neighbor

gene id symbol gene type direction distance location
CI01000016_02568824_02575674 DECR1 coding downstream 13801 2568610 ~ 2575674 (-)
CI01000016_02467451_02477544 NA coding downstream 111931 2467451 ~ 2477544 (-)
CI01000016_02328065_02334778 NA coding downstream 253739 2327812 ~ 2335736 (-)
CI01000016_02288848_02311105 PLEKHO1B coding downstream 278370 2287297 ~ 2311105 (-)
CI01000016_02263634_02265929 MRAP2, MRAP2A coding downstream 323546 2263245 ~ 2265929 (-)
CI01000016_02679833_02695963 SH3BP5B, SH3BP5 coding upstream 55663 2678538 ~ 2695963 (-)
CI01000016_02802780_02815803 NA coding upstream 179724 2802599 ~ 2815803 (-)
CI01000016_02817855_02829699 NA coding upstream 194980 2817855 ~ 2830457 (-)
CI01000016_02884294_02912568 MAP7D1A coding upstream 259971 2882846 ~ 2912568 (-)
CI01000016_02936606_02957342 NA coding upstream 313234 2936109 ~ 2957875 (-)
G95061 NA non-coding downstream 7755 2581258 ~ 2581720 (-)
G95103 NA non-coding downstream 47257 2541973 ~ 2542218 (-)
G95102 NA non-coding downstream 47673 2541583 ~ 2541802 (-)
G95100 NA non-coding downstream 51505 2528027 ~ 2537970 (-)
G95091 NA non-coding downstream 67472 2521721 ~ 2522003 (-)
G95121 NA non-coding upstream 28032 2650907 ~ 2651108 (-)
G95132 NA non-coding upstream 82595 2705470 ~ 2707051 (-)
G95044 NA non-coding upstream 97251 2720126 ~ 2726237 (-)
G95136 NA non-coding upstream 110873 2733748 ~ 2734245 (-)
G95138 NA non-coding upstream 133996 2756871 ~ 2757185 (-)
G94786 NA other downstream 313200 2270836 ~ 2276275 (-)
G95070 NA other upstream 362385 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 1012732 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 1242886 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 2289833 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 2702644 5325519 ~ 5332874 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010111 col6a4a coding NC_007127.7 CM002900.2 36650984 ~ 36719705 (+)