CI01000016_02936606_02957342


Basic Information

Item Value
gene id CI01000016_02936606_02957342
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2936109 ~ 2957875 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_02936606_02957342.mRNA
TGCTGCAGAAACATTTCTGTTGTGTAAAAATTGTTTTTTATATTAGCAGAGCATTTACAGCATGGTTACAACTACATGGCATAAAATCTATAATAAATAAAAAAGTGTTTTTGATGACTTTTTACTTGACTCTTTTTACTTCAGGTTATTTACATATTATGTGACCAAAGGTAATCAGATTACATTACTTTCACATTTCCCCCCCCCTAAGTGACTTCTATTAGTGAAAAAGTTTTTTTTTTTTTTTTTTGTAATGGAACAATTTTGCACAGAAAAAACATACTTCCAAAACAATGACAGGCAAATAGTTATTGGGCAAGCAGCGGTTGTACTTGTAGGCGAGGTCGCACAGCTGTGGAGCGTGACACGAGGAGGGCGGGGCGCAGAAGAAGGACGTGCCTAAAAGATCCTCCTCAGAGTCTTACCTGAAAAAAAACTACAGGAATACTTTACGCCATAGTGAAGGTATGTCGAGGACGCGATCACAGGATGTTTTTTTTTTAAATAGCTAGGCACTATTTTCGAGATACAACATGTATACGACTGAACGCAGGCGCATGAGCCTGCACGAGACCAAGAGAAGGGATCCAGTCCGAGTTTCAGCTGGAAGTTTATGGCAGGATCCTTTGGCTCTCGAAATAGGCGGCGGGAATAAAGGTATAATATCCCCGCGGAGTCGGACCAGGGCTTTATCCGTGGTGTATATCGCCGTTGAGGACGGGTCTTTGCCTCAAACTGAGGAGAATCTTTCACAGACATGTCTTACAGAAGCCTGTGCGGAGGCGCACGCTGTGCTGAAGAGCATTTCTTTTGAGCGCATTGCTTTGGGCACAACTGAAATCCTGGACACTTTTTACAACGCAGGCAAGTTGTGGCATATGAATAACTCTATCTGCCAGCCGTCTCTGTTTTATCACCTGGGTGTCAGAGAGAGTTTCAGTATGACCAATAATGTCATCCTGTACTGTAACAAACAAGAGGACAGTCTTCAAGTTGTGAAGGAACAATGTGGGAGCTACACTTTTATCCCCTACATGGTGTCACCACAGGGTAAAATATTTGCCTGTGATGCAACACTGATGAGGGGCATCAAAGATTTCCTTCATTCCAGCTTTAAATTTGAATCCCTGCTGACCCCTTTGGTGGATCGACTGGTTAAGTTGCTGGAAAGTGTTCACATTCATTCTAGCGAATACCTCCATGAGGCAATCCGCAGGGAGATCCGTCTGGCTCGAGAGCACTTCACTGGACAGGCTCTAAGTCAGGAGCTGGGCCGGATCCAAAAGCGTCTGGATTCGGTGGAGCTTCTGAGTCCAGACATTGTTATGAGCCTCCTGCTGTCTTATAGGGACATTCCGGACTACGAATCCATAATAAATCTGGTGGAGACCTTGAATAATTTGCCCATGTGCATGATGATAGCACATCAGAACATTAAGTTTCAGTATATTTTTGCATTGAACAGGAGAAATCAACCTGGTGATCGTGACAAGGCTTTAAAGCTCATTTTACCCATTGTGGAATCGGCAGGCACCGTGGCCTCAGATGTGTACTGCCTGTGTGGGCGCATCTACAAGGACATGTTCCTGAGTTCAGGCTTCAAAGACACATACAGCAGAGATCGAGCATGTTACTGGTATGGCAAGGCCTTTGAGATTGAACCCTCTTTGCACTCCGGAATCAATAACGTTGTGCTCCTGATGGCTGCTGGCCATGAATTCGACACCTCTATTGAACTGCGGAAAATCGGTGTCACACTCAGTAGCCTGCTGGGCAGGAAGGGCTCTCTTGAGAAGATGCAGGACTACTGGGATGTTGGTTTTTATTTAGGGGCTGGAATCTTGGCCAATGAGCACAAGAAAGTCATAGAAGCTTCCGAGAGACTCTACAGACTCAAAGCACCAATGTGGTATGTTGCATCCATTATGGAGACATATATACTATACAAGCAGTTTGCCAAACCCAAAGAAGTGAATCATCCTAAACAGGAAACTGTGGACTTTTGGATGGAGTTGATGGTGCAGGCGTGCAAGCCTACAGTTTCCACAGCACGCTGCCCGGTTCTTATTCTGGAGCCCACTAAAGTGTTCCAACCCAGTATAATAAGCGTAAGTGAGGAAGATGACAGCCGTACGGTGCAGCTGAGATACGTCACTCCACTCGAGAAAGGTCTCCATGAGTGGACTTTCCCAGCATCTGCTATTCGTGGAGTAAGCCCTTGGACATCTTGTTTAGAGCTCAGGTTGCAAAACAAATGGTGGTGGATGTTAATATTTAAGTTTGAGAATCCCCTGTCATTCCACTCGTGCAGCATCTCCAAGTTCGACGAACGGAGCTGCTTCCTGTATGTCCTGTACAATTCAGATGACTTCCAGTTGTACTTTCCCAGTGATCTTCATTGTAAAGGGTTCTGTGATTTGGTGAACTCTCTATTGCATCAAACAGAAAGTCCCGTGGAAGATTCCAGTCCAGTCAGGGGAGGGGAAGGAGTTTTAGAGTACATTTATGAGAGCAATGAGAATGGAGACAAGGTGGTGCTGGGGAAAGGAACCTATGGAGTGGTGTATGCTGGACGGGACCTCAGCAATCATGTGCGCATCGCAATCAAAGAGATCCCAGAGAAAGACAGCACCTACTCTCAGCCGCTCCATGAGGAGATTGCCCTACACAAGAGGCTGAAGCACAGGAATATTGTTCAGTATTTGGGATCAGTCAGTAAGGATGGCTTCATCAAGATCTTCATGGAGGAGGTTCCTGGAGGAAGTTTGTCCTCTCTCTTACGATCAAAGTGGGGACCTCTTAAAGATAATGAGGTGACCATTGTTTTCTACACCAAGCAGATTCTGGAAGGGCTGAAATATCTCCATGATAATCAGATTGTCCATAGAGACATTAAGGGTGATAATGTTTTGATAAATACGTACAGTGGCGTGCTCAAGATATCAGATTTTGGCACCTCTAAGAGACTAGCAGGAATCAACCCATGTACAGAGACATTCACAGGCACTCTGCAGTACATGGCTCCAGAAATCATCGACCAAGGTCCTCGTGGGTATGGCAAACCAGCTGATATCTGGGCTCTAGGTTGCACCATCATAGAAATGGCCACAGGGAAGCCACCTTTTCATGAGCTGGGAAATCCTCAGGCAGCCATGTTTAAGGTGGGCATGTTCAAGATTCACCCCCCAGTGCCAGAGTGTATGTCAGAGCAAGCTAAGAGCTTCATCATGTGCTGCTTTGAACCCAACCCAGACAAGAGAGCTACAGCTTCAGAGCTCCTGAAGAACAGCTTTCTGAAGGGCAGTCCCAGGAAGAGGGCAAAGCCTCAATCCAACAACTCTCTGAAAGAACCTGCCGCACCTGAAATCACTTATTTGCCTTCATGCAAATTTGCTGCCGGTAGAGTGCCAGATGAGCCTCAAGGAGACATGACCACAAGTCCAGCTGGTTCTGGAGAGAATCTAGGTCTGTTCATGCTGAGAAAGGACAGCGAACGGAGGGACACGCTACATAGGATCCTTACTGAGTACATCAGCCATGTAGTTCAAAACATTCAGGAGTCACTGCCAGAGGTGGAGGAACCGTGCATTACCTCAGATCACATTAGCGAACTGATTTGCTGCCTCCGAGAGAATATCCGCTCTCCAGACAAAAGGCACCTGAGTAACAGCCTCCTGACTTTGCGCTCCAGTCTGCTGAACTCCTCTGTGCCTCTCAGCAGCCTGCAGGCGGTGCTCTTTAGCTTACAGGATGCAGTCAAGAAGGTTCTGAAGAAACAGCAGATCAAACCTCATTGGGTGTTTGCTTTGGACAACTTGCTGAGGCAGGCTGTACAAGACACTATCACGGTTCTGCTGCCAGAGCTCAAGCTTCAGCTACAGTCATCATTTGAAAATGAGGAGAGTTCTCTAGAAACTGAGCAACACACAGAGGCTGATCATGAACCAGCTGTCACACCTCTCGCAAAGGACAACGAGGAATCGGGTATTACTCAGAATTCTGAAGAGGGTCAGGCCAAATGCAACGATCTCCACAGTGACCTCATCTCCAGTCACTCTTCACTCGCAAAGAAGCTATCAGAACTTCGCCTTGAGTCTATGAGGTTGCTTATTCAGCTGAATGAAAAGGAGAAAGAATTCCAGGAGCTTCTGAAGAACTCCATTCATACCAAACAAAGACACATCAACGCCCTGGAGCTTGTTTTTCATGAGTTCACCTTGGACAGTCTCCTCCATCTTGCCTGCAGAGATGATCTACAGTACTGTGGCATCAAATACTATGAGCTCAGTGAGTTTGCAGTGTATAGAGTCTGTGCCTTTTTTGCACTATTACTTTACATCTGTGCCTGACACTAAGATGAAAATAAATAATTTTATGGAAAATATATAATACTGTTCAAAAGTTTGGGGTCGTAAGATCTTTTAATGTTTTGGTGGTCATCCAGGCTGCATTTTTTATAACAGAAATAAAGTGAAATATTATTACGATTTAAAATATTTTTCTAATTTAATATATTTTAAATTGTAATTTATTCTGTGATGGCAAAGCTGAATTATTAGTATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATTCTAATATGCTGATTTGGCGCTCAAGTGACATTTCTTATTATTACAACTATGGTTGCAAGATCCATTGAACTGTATTGTTAAAGACTGAACTTGCCACCATAGTTGACTTTGGGAAACGTACCCGTTTATCTATCCTGTGTTCTCTGTCACTATTTGCCTAAGTTCGTGTTCATTATTTGTTGCTATAGTTTCTGATTGAGTTTCGCACATTTCCCTTGATTTTGTTAATCACGTAAAAAA

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K04426 MAP3K5, ASK1; mitogen-activated protein kinase kinase kinase 5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_02936606_02957342.mRNA True 4846 mRNA 0.45 27 2936109 2957875

Neighbor

gene id symbol gene type direction distance location
CI01000016_02884294_02912568 MAP7D1A coding downstream 23541 2882846 ~ 2912568 (-)
CI01000016_02817855_02829699 NA coding downstream 105652 2817855 ~ 2830457 (-)
CI01000016_02802780_02815803 NA coding downstream 120306 2802599 ~ 2815803 (-)
CI01000016_02679833_02695963 SH3BP5B, SH3BP5 coding downstream 240146 2678538 ~ 2695963 (-)
CI01000016_02589744_02622875 NA coding downstream 313234 2589475 ~ 2622875 (-)
CI01000016_02991852_02994428 CITED2, CITED4B coding upstream 33345 2991220 ~ 2994428 (-)
CI01000016_03060171_03060612 RAB42B coding upstream 101668 3059543 ~ 3060612 (-)
CI01000016_03062846_03063013 NA coding upstream 104971 3062846 ~ 3063272 (-)
CI01000016_03064633_03068201 NA coding upstream 106687 3064562 ~ 3069092 (-)
CI01000016_03072793_03080040 NA coding upstream 114853 3072728 ~ 3080040 (-)
G95172 NA non-coding downstream 58370 2877531 ~ 2877739 (-)
G95166 NA non-coding downstream 70978 2864769 ~ 2865131 (-)
G95161 NA non-coding downstream 87206 2848679 ~ 2848903 (-)
G95158 NA non-coding downstream 96415 2839470 ~ 2839694 (-)
G95157 NA non-coding downstream 97589 2838255 ~ 2838520 (-)
G95181 NA non-coding upstream 60919 3018794 ~ 3019070 (-)
G95199 NA non-coding upstream 85792 3043667 ~ 3043866 (-)
G95191 NA non-coding upstream 92016 3049891 ~ 3050726 (-)
G95203 NA non-coding upstream 133490 3091365 ~ 3091751 (-)
G95210 NA non-coding upstream 147885 3105760 ~ 3106448 (-)
G94786 NA other downstream 659834 2270836 ~ 2276275 (-)
G95070 NA other upstream 27385 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 677732 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 907886 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 1954833 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 2367644 5325519 ~ 5332874 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location