CI01000016_03647744_03675574


Basic Information

Item Value
gene id CI01000016_03647744_03675574
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3647653 ~ 3675585 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_03647744_03675574.mRNA
AGCGTGGAGGAATGGTTAGGAGTGGGACAGTCATGAGAGAAATGCTATTTGCCGTTTTTATACTCTCGGTCATTCGATCTGCAGGATCTAAAAAACCGGACGAATGTCCTGCAAAACAGGAAATGTCATGTGAGAGCCTGCGCACGACTGAGGGTTACACGTACCCGGTAATCCTGAGCAACCTCGGCTCGAGGGATTGCGAATATGCGTGGTACTTTCTGAATGGAACATGCATTGTTCATTCAGACGGCAAAGAGAAAATGGATTTTGTAGTGGCAGTGACACTTGGAAATCTGACCGTCAGCGCCTGTGAGGACCTGCAGTGGGAGCTTCGCTGTGACAGCATTCAGACCTGGGAAAGGTTCACAAAGAGGATGCATTTGGATCGGTCCGGAATCCAAAGGAATGAAGAGGAAAATAGCCAGCTCTTGAGGATGAGGAAAACCAGGAGAGGATTCACCTGACACCAGCAGCCTACCTGTAAATGAAAGAGCTGATGGGCAGTTAGGTCTGTATTATAAACAATTAAACAATAATAATTAGGCCTATAATAAA

Function

NR:

description
hypothetical protein cypCar_00043820

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_03647744_03675574.mRNA False 555 mRNA 0.46 4 3647653 3675585

Neighbor

gene id symbol gene type direction distance location
CI01000016_03555967_03558776 C1H1ORF43, CUNH1ORF43 coding downstream 88467 3555300 ~ 3559186 (-)
CI01000016_03322103_03326683 NA coding downstream 316891 3322003 ~ 3330762 (-)
CI01000016_03082653_03084658 NA coding downstream 562995 3082386 ~ 3084658 (-)
CI01000016_03072793_03080040 NA coding downstream 567613 3072728 ~ 3080040 (-)
CI01000016_03064633_03068201 NA coding downstream 578561 3064562 ~ 3069092 (-)
CI01000016_03719404_03722988 NA coding upstream 43582 3719167 ~ 3723058 (-)
CI01000016_03834829_03843163 ZNF687 coding upstream 158915 3834500 ~ 3843266 (-)
CI01000016_03881771_03883341 NA coding upstream 204908 3880493 ~ 3883466 (-)
CI01000016_03921124_03930996 NA coding upstream 244470 3920055 ~ 3931162 (-)
CI01000016_04044171_04047247 TRIM108 coding upstream 368430 4044015 ~ 4047305 (-)
G96658 NA non-coding downstream 13193 3634259 ~ 3634460 (-)
G96614 NA non-coding downstream 21649 3623837 ~ 3626004 (-)
G96655 NA non-coding downstream 38776 3608336 ~ 3608877 (-)
G96644 NA non-coding downstream 66224 3581219 ~ 3581429 (-)
G96637 NA non-coding downstream 83915 3562854 ~ 3563738 (-)
G96626 NA non-coding upstream 58940 3734525 ~ 3800968 (-)
G96622 NA non-coding upstream 105219 3780804 ~ 3786775 (-)
G96612 NA non-coding upstream 111821 3787406 ~ 3791803 (-)
G96672 NA non-coding upstream 133925 3809510 ~ 3811499 (-)
G96675 NA non-coding upstream 144082 3819667 ~ 3820628 (-)
G95070 NA other downstream 662012 2985260 ~ 2985641 (-)
G94786 NA other downstream 1371378 2270836 ~ 2276275 (-)
CI01000016_04921091_04922518 NA other upstream 1237123 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 1649934 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 1736674 5412248 ~ 5415906 (-)
G97341 NA other upstream 2483401 6158986 ~ 6159721 (-)

Expression


Co-expression Network