CI01000016_03845787_03847359


Basic Information

Item Value
gene id CI01000016_03845787_03847359
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3845787 ~ 3848448 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_03845787_03847359.mRNA
GTGATCCAGACCATCTCAGGCTGGATCAGTGGATGCTCAACATGAAACAACAGAATTGGACTCCTAACAAGGGTTCTCGTCTGTGCAGTGAACACTTCGAGAGTCATCACTTCACCACTGACTCCAGGGGAAGGACATGTCTGAAGGACACCGCCGTGCCTACCGTTTTCTCTTTCTCCAAGGGCAAAGAACAAAAACCAAAAAGAAGAAGCTTGGTTAGTATTAATGAGGTGGTAAGTGGCATCCCTGTTTCTGCTGTAAATAATAATGAGGAGGTTGCATATGTAAACAATGGGAGTAGCGTCAACAGCCTTGCTGCCAATCAGAGAAATGTCATGATGATGGAAGACACATCTGAACAGGCCTTTGTTGCTCAAGATGTCATGCATGATGACATTGCTCTGACAGCGAATGTGTGTGAGGATGTTGGTTTGGCACAGCTGCCTAGCAGCTCTCTGAGTCTTTCAGAGTCTCCAAAAACACTTAAAAGGAAAGCTTATGAGGTAAAGGACAAGCTATGTGTAGGTAAAGGCAAGAGTTTCTTACTTGAAAGTCTGGATGATGTTCCCCGGGAGATCTTTCAGAGAATACAAAAGAAGAAAAGGTCAGTGTTTTCCAAAACCTTGAAGCAATTCACAACTACACTGCACTTCTACTCTCCAAAGGCCTATGACTATGTGAGAGAGAAGTTTCTCTTGGCTTTGCCTCATCCTCAGACCATAAGAAAATGGTACAGTAGCATCTCTGCAGATCCTGGATTTACTGTTGCTTCATTCACAGCTTTAAAAAGTCGTGTTGCTGAGCAGAAGAAAGTCGGAAAAGACACAGCATATCCTGCTAATATGGCAACGCCTTCCCGAAATGCAAGAGTGAAAACGCTGTGATGACACATTATCGTTAGGCTTGTTCGAGATGCATCGGCGCTGCGCACACCGATCGGCGTATGACATCAAACCCTCCATCCCAATGTGCATACTATCCACCCTATCCGCCCTAAATAGTATTGAATATTACTAATGTTACATACTATTTAGGATGGATAGTATGCGCATTGAGACACAGGCCAAGTACTGGGAGAGTGATTGTAAAGCATACGATTCCTTATGCTTTTGAATCGCTCTTGCTGTACTTTGATGTCATAGGCCGATCGGTCTGCGCAGCACCTATGCATCTCAAAACAAGTCTATTCTCTATTGAATCGGATCTTTTCAATGAATTATATGATTATAAAATATGTACATAATCGCAGAGTCTTTGAAACATTCCAGTTTTTTTGTCATTCCAAAATGAGATGGTGGTGTTTTATAAACTAAGTGGGCTAAACAACACTTAACATTTAAACATTATAAGATGCTGCAATAACAGCCAATAGGCAACTAATGTGGTCATTTTAAACATTTTTTCCCAATGTACTATTCATTATTTTTAAATGTAAAACATTTTTAATGCAGGGAAAATACTTAAACATAAATGATGAAGGCATAGTAAAAATTCAAAACAGTTTTAATGTGAGATTCATATATGACAAAAAGAAACATAAAAGTCAGCAATGAATGTATTGTTTTAGAAAAACATACACAGTGTAGGTTCTGGCTATAGGCCTACACGTCTTTTATGTTTGGAGAAAAAAAAAGTTTTATATTTAATAATAGTGTTGCGGTATGGCCAGTATTTTAATAAATTATTTTATTGTTTCAGTTGTACTGTTTTTATGGTGCCAAATTGTTTTTGATTCTCGTTGAGCGGTGCTTTGTAGTCCTGCATCGCACTAGTGCAGGCATTTTCACAGCGTGTTGCATTGTAGGGGGCGTGCTCTGGTTTTTGCGTGCACGCAATTGATCACTTCAACTGCCACTCACTCGTCTCGCAAAAGCAGATTGGTCAAGCATGTACAATCATCATCAGCCAAGCAAACACATTCATTGGGTTCTTTAGTGTGCAGATTGTTCGATGACCGTGGAATTTATGTCAAA

Function

NR:

description
Zgc:153292 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_03845787_03847359.mRNA True 1973 mRNA 0.40 4 3845787 3848448

Neighbor

gene id symbol gene type direction distance location
CI01000016_03809704_03831736 NA coding upstream 13387 3809704 ~ 3832400 (+)
CI01000016_03798165_03803686 NA coding upstream 41999 3798037 ~ 3804627 (+)
CI01000016_03780734_03792228 NA coding upstream 53371 3780447 ~ 3792416 (+)
CI01000016_03767260_03771612 NA coding upstream 73959 3766998 ~ 3771828 (+)
CI01000016_03726678_03729904 NA coding upstream 114777 3726443 ~ 3731010 (+)
CI01000016_03862433_03863305 NA coding downstream 13985 3862433 ~ 3863487 (+)
CI01000016_03865256_03876385 NA coding downstream 15350 3863188 ~ 3876451 (+)
CI01000016_03889898_03894185 NA coding downstream 40385 3888833 ~ 3894730 (+)
CI01000016_03895417_03896392 NA coding downstream 46879 3895327 ~ 3896450 (+)
CI01000016_03912450_03917198 NA coding downstream 63414 3911862 ~ 3917219 (+)
G95533 NA non-coding upstream 118290 3669705 ~ 3727497 (+)
G95494 NA non-coding upstream 211789 3633635 ~ 3633998 (+)
G95524 NA non-coding upstream 314850 3530583 ~ 3530937 (+)
CI01000016_03965750_03967383 NA non-coding downstream 85789 3965498 ~ 3967397 (+)
G95500 NA non-coding downstream 138324 3986772 ~ 3989111 (+)
G95621 NA non-coding downstream 144589 3993037 ~ 3993261 (+)
G95622 NA non-coding downstream 144826 3993274 ~ 3993474 (+)
G95623 NA non-coding downstream 145358 3993806 ~ 3994081 (+)
G93406 NA other upstream 2918255 905400 ~ 927532 (+)
G95439 NA other downstream 13727 3862175 ~ 3862305 (+)
G95648 NA other downstream 424188 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 986110 4829592 ~ 4837457 (+)
G95792 NA other downstream 1371432 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 1557421 5405791 ~ 5407963 (+)

Expression


Co-expression Network