CI01000016_03912450_03917198


Basic Information

Item Value
gene id CI01000016_03912450_03917198
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 3911862 ~ 3917219 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_03912450_03917198.mRNA
CTTTAAAAACTGTTTTTAAGAGTGGTTATGGTGCACCATCATGGATAGTGAGCACCTTTAATAACTTAACTAAAATTTAATGGCATGTGGAAAAAGTAAATTTAAAAGGAGTGATGCACTTGTGCGCAAAAGTCTCTAATTTGGGTTCAGAGATGACAATATTTGGGTTAGCCAGTCTGAAATTTCTCACACTGAAGAACACATTTCACACTCAACAACAGCCTACACAGTTCTCTTGAGGAGAGATATTGACATATTGAGAGTGTAACAGAAAAACTATGCTAAAACTCCCTGAGTACAAGACGTTCTTCTAAGTGACTGTTCCTACAGAATGTGTACTGTAAATTACTTTTAAGCATGAGTGAAAAGGCAAATTTGTTGTAAAATCCAATTGAATTTGAGTAAATTTGTAAAAGAAAATTGTAAAGCAACACTTCTTCATAGCGTCACTGAATAACAACTGTAGCAAGTTTTAAACTCTCAGATGTTCGGATTAGAGGAAGTTAAGGAAAGGAGGAGCTGATGATGTTTAAATAAAGAGTTGTGACCACATAATGTAGAGGAGGACTGACAGAAAGGGATGATAAAATGGCTAAGTGTCATATGTGTCTGCTGGGACTGATAATTCTCTTTCCATTTTTCAAAGGTACCAGTGGAGTGGATGAGACTCATGTGTTCAGCAGTTCTGGTGAAAATGTCCGTCTGCCCTGTAATAATGCTCTTTCTGACTGCACATCAACTACATGGAGCTATAATAAATACAAAGATTCACAGACCAATGAACTAGTTGATGGAGGGATAAAGAAGAATGATATAGAGAGACGTGAGAGACTGAGTGTGGGGACTGACTGCTCTCTGAACATCAAGAAAGTCACACAAGAAGATTATGGCCTTTACACCTGCCGACAATATGTGAATGGACAACAACAAGGAACTGATGCACGTGTTTATCTGCATGTTCTTTATGTCTCTTCATCATCCTCACAGACTGAGATCAGACCAGGCAGTTCTGTGACTCTCTCCTGTCAGTTGTATTCATATGATAGATACCCTTGTGATACTTTGGTCCGTACTGAGGGAATTGAGCTGATCTGGGTGAATCAGGCTGGTGTTAGTGTGATGACAGACTCCAGATATCAGATATCATTCTCCTCAACACACTGTATCAGCACTCTGACTACAACACTCCTGAATGAAGATCTCAACAGAGATTTGAGATGTCTGATTAGGGAAAAAAAACTGAAGACCCCAACCACAACAAGTAACAAGTATTCAGTGATGGTTGTTATCATTCCTGCATTAGCCGTTCTCCTTCCTGCTGTTATGCTTTGGGCGATTTATACAAAAAAGGCTGCTGCTGACACATGTGACGTATTCTGGGATTCCTGCAGAAAACATGTCAAAGAGAGCAATGTGAGTAGACACCGCCACATCCATTCATCAGTGACCACTGACGCTCTGAATAAGAGGAAATGACCCAGGGGCCAGATTCACCAA

Function

NR:

description
diverse immunoglobulin domain-containing protein 2.1 transcript variant 5549, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_03912450_03917198.mRNA True 1497 mRNA 0.40 5 3911862 3917219

Neighbor

gene id symbol gene type direction distance location
CI01000016_03895417_03896392 NA coding upstream 15412 3895327 ~ 3896450 (+)
CI01000016_03889898_03894185 NA coding upstream 17132 3888833 ~ 3894730 (+)
CI01000016_03865256_03876385 NA coding upstream 35411 3863188 ~ 3876451 (+)
CI01000016_03862433_03863305 NA coding upstream 48375 3862433 ~ 3863487 (+)
CI01000016_03845787_03847359 NA coding upstream 63414 3845787 ~ 3848448 (+)
CI01000016_03942653_03949757 NA coding downstream 25264 3942483 ~ 3949920 (+)
CI01000016_03951956_03957698 NA coding downstream 34191 3951410 ~ 3957882 (+)
CI01000016_03965750_03967383 NA coding downstream 48279 3965498 ~ 3967397 (+)
CI01000016_03977127_03981586 NA coding downstream 59860 3977079 ~ 3982568 (+)
CI01000016_04008568_04016209 NA coding downstream 91301 4008520 ~ 4016502 (+)
CI01000016_03798165_03803686 NA non-coding upstream 105862 3798037 ~ 3804627 (+)
CI01000016_03767260_03771612 NA non-coding upstream 141635 3766998 ~ 3771828 (+)
G95533 NA non-coding upstream 184365 3669705 ~ 3727497 (+)
G95494 NA non-coding upstream 277864 3633635 ~ 3633998 (+)
G95524 NA non-coding upstream 380925 3530583 ~ 3530937 (+)
G95500 NA non-coding downstream 69553 3986772 ~ 3989111 (+)
G95621 NA non-coding downstream 75818 3993037 ~ 3993261 (+)
G95622 NA non-coding downstream 76055 3993274 ~ 3993474 (+)
G95623 NA non-coding downstream 76587 3993806 ~ 3994081 (+)
G95439 NA other upstream 48005 3862175 ~ 3862305 (+)
G93406 NA other upstream 2984330 905400 ~ 927532 (+)
G95648 NA other downstream 355417 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 917339 4829592 ~ 4837457 (+)
G95792 NA other downstream 1302661 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 1488650 5405791 ~ 5407963 (+)
G96389 NA other downstream 3243422 7160641 ~ 7161290 (+)

Expression


Co-expression Network