CI01000016_04264738_04270463 (ABHD16A)


Basic Information

Item Value
gene id CI01000016_04264738_04270463
gene name ABHD16A
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4263929 ~ 4272171 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_04264738_04270463.mRNA
AGTAGCTGTATTTTACATCACGACTAAGCCAAGGTATGATCTTGTTTAGTTTGAATATTCAGATAGCTGAATCAAAGATGTTATGCTGCATTTATAGTATTAACTACTGAATAAGTTGTACAAAATTTATTTTAATGTAGAATCCAGTATGATTGATGTTGTTATTGTGGTTGTACTATAGTTCAATATCATTTTGATATTCTGCCTTTAAAAGAGTGTATTGTGGTTAGAGAACGTGTTGTTGTTTTGTTGTGTTTGGTAGTCTTTTGTAAAAGAGAGTCTGTGTCTTACAAAGATGTAGTTAATGGCATTTTGTAATAATTGTGTAATTAAATAACAAGGAAGTGCTACTAATTGTATATGATATATTTGAGATACATTGGTGGTACATTGTAATTTTATAAATGACAGATTATATCTGCAGATTAGAGTAATGTGTTATTGACCACAAATAAAAAAAATCAACAATTTCTGCTGTCTCCTGTGAGCTGTAGTTCAGCGTTTTATAAATTAATACTTTCATTCAGCAAAGGCTCATTAAATTGATCAAAAGTGACAGTGATGACATTTATAATGTTACATAAGATTTCTATTTCAAATAAATGCTCTTTTAAATTTTTTATTCAGCAAAGAAACCTGTATTTGACAGCACAACATTTAAACATAGAATCCTCTGTCCCATGAAACACATTTTGCTGGACTGTAATACTTCTACCACTTTGAGGAACTTGTTTTATTCTGTTGATACCAAGTAAATCCAAATTTAGTCTTAAAGGGTTAGTTCACCCAAAAATGTTTGTCATTAATTACTCACCCTCATGTCGTCCCAAACCCGTAAGACCTTTGTTCATCTTCGGAACACAAATTAAGATATTTTTGATGAAATTCGAGAGGTTTCTGAACCACACATAGGCAGCAATGTCATTGCACCTTTTAACGTCCAGAAAGACATTGTTAAAATAGTCCATGTGACTACAGTGCTTCAATCTTAATGTTATGAAGCGTCGAGAATACTTCTTGTGCGCAAAAATAACAACTTTATTTAACAATTTGAACTGTTGTCATACGCAGTTGACGCAGTGAACGCAGTGCAGCGCTTCCATGTTTACGTCAGAACGCCGGCTCATTATTGGCTGACGCTGAGCAGCATGACGCATGCGCGCCGTTCTGACGTAAGTACGAGGAAGCACTGCACTGCATTCACTACATCAACTGCGTATGATAACAGTTCAAATTGTTAAAGTCGTTATTTTTGTTTTGTTATTAATACATTAAGGTTGAACCACTGTAGTCACGTTGACTATTTTAACAATGTCTTTAATACCTTTCTGGACCTCAAAAGGTGCAATGACGTTGCGTATGTGTGGATCAGATTCATCAAAAATATCTTAATTTGTGTTCTGAAGATGAATGAAGGTCTTACGGGTTTGGGATGGCATGAATGTGAGTACTTAATGACAGAAATGTTTTTTTTTTTTTTTTGGGTAACCCTTTAAGGTTTTTAGAAAAAAATGAATCCTAAACATATATATATATTTTTTTTTTCATTAAACACTGCTGAATTCAACAGAACAACATTTAAAACATCACATCTGACCATCCTTGCTGTGCCATGAATAGTATTGTTTTCTAAATTGTGTCAGAATGAACAATTGTAATACCAAGCATTAATATTGTGGTGAGGTATTGTGGGCTGAGATCATTAATAATGATATCTCTTCTAGGGTACATCTGCAGCAGTAAACTGGTTCCTTTCAGTCAATATGTTGGCACAGCGCTGGTCTGTCTGCTGGGAGTGGCCTGTCTGAGAGGGTGGGGGCGCTGGAGAAACCCAGAGTACCTTCAGTTCATCTCCATACTGGAGGAGACCAGGAAGAACCACACGCCTAGCAACAAGAAAAAACTGGCGTGCTTTGACTTTGACTTCAAACACTGGCCTGTAGATTTCAGCTGGAAAGAAGTTAGTAGTCCGAAGTTGTCTAAAGGTGGTGTGTCCCTGCTACGGCCAGAGCCGAAACACAGAGGAGCAGCAGACGGTGTGCTGAGTTCAGTTCGCACACTGCCATGCCACATCTTAAGTTATCTGATAGCTCACTCTTTCGGTCGGAGGATGCTGTACCCGGGGTCAGTGGGTCTACTGCAGAAGGCCATGAGGCCCATGTTACAGCAGGGACAGGCCAGACTCGTAGAAGAGTATGATGGTCAGCGGAACAAACTGGTGGCTTGTGATGGGAATGAGATTGACACCATGTTTGTGGATCGGAGGAGAGATGGAGGACCAGCTGGAAAAACTCTGGTGATCTGCTGTGAGGGAAACGCAGGATTCTACGAGGTCGGCTGCATGAATACGCCACTGGAAGGTGGATACTCAGTGTTGGGCTGGAATCACCCAGGGTTTGGCGGCAGTACAGGAGTTCCATTTCCTCAAAACGAAGCCAACGCGATGGACGTCGTCATTCAGTTTGCCGTGCACAAACTGGGCTTCCAGTTGAGTGACATCATTGTGTACGCCTGGTCAATAGGGGGCTTCACAGCCAGTTGGGCTGTGATGTCATACCCAGAGATCCGAGCTCTGGTTCTAGATGCCTCATTTGATGATCTTTTACCCCTTGCGCTGAAGGTCATGCCAGAGAGCTGGAGACCCTTGGTCACCCATACAGTGAGGCAGTACATGAACCTGAACAATGCTGAACAGCTTTGCAAGTACCAGGGTCCAGTGTTATTGATTAGAAGAACTAAAGATGAAATCATCACTACCACGGGTCCAGAAGACATCATGTCCAACAGAGGGAATGACCTGTTACTCAAACTACTCCAGTACAGGTATCCTAAGGTCATGACAGATGATGCTATCAGAGCCGTCAGGCAGTGGCTCGCAGCAGGGACACAGATTGAAGGAGAGTCTGTGTACACCGGCTATGAGGTGGATGATGATTGGTGCTTGTCTGTGCTGCAGTCCTATCAGACAGACAGAGAGACACTGTTCCCCTGGAGCGTTGGTACGTGCTTCATACACAGTAGCCATGCTCACTTCCACAGCTTTAAATGGGTTGGTGTGGTACAAATGGGGACGTTCAGCAGTGATTTCTTTTACTATGGCTACAGTTTCTGCTTAAAACAATACAGACATTTGACTGTCGGCAATCTGATCCTCTATTTTAGGTGAAGACATGACGCTCGAGGGCAGAAGACAGCTTGCTCTATTCTTGGTATGTTACAAAAATATCAGAGTTTACACCTTGTTATACTGTAGTGTAGTATATTGTAGTTACCCACATTCTTGCATATCAGAGTGCAATAAGCTCTTATATGCTTTGTATCATACTTCATTATCACAGTTCAAACCATAATTCCCATCTTTATATATAGTATTTAAGCTATTAAGGGCTTTTGAGTAAGTATTTGTTATCATTAACCGGTCATTTCTCTCTCTCTCTCTCTCTCTCTCAGGCACGGAAGTATATGCGAAATTTTGATACTACACACTGCACTCCACTCCCCATTTCTGAGTTCAGGCCTCCCTGGAGACTCTAGAGAGCCAATGAGAAAGACAGGAAGAGAGCACTGGAGGTCAGAGGTCAAAGGGAATCACATACCGGTACATTTGAGTCAGTTCTGTGGGACGGCAGGAAGGCGTTTAGAATTAGTCCTTCATCTAAATGTGACAGGGTTACTCGTGTTTTTTTTTTTTTCTTTGTTTTTTTTCGCATGATTTGATAGAGGCGTTTTAAATTATTGGTTGTGCCATGCCTCCATCGCAGTGGAAATGAAATGTGCCGACGCTCAGGTTTGTCGTCACCGTCTGGACGTTTGTTTCTTTTGAGAGACTCTCATTGATGGGACTCAAAGATCTCTTGCCTCTTTCTCAGTCTGTTTTTATTTTTATCCTCTATTTTGTGGAGCACTGTAATTATGAACAAATCGTATCGTTAAATAATGTTCTGAATGTTATATTGTATATGAATATTAAATAAA

Function

symbol description
abhd16a Predicted to enable acylglycerol lipase activity; palmitoyl-(protein) hydrolase activity; and phospholipase activity. Predicted to be involved in monoacylglycerol catabolic process and phosphatidylserine catabolic process. Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human ABHD16A (abhydrolase domain containing 16A, phospholipase).

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_04264738_04270463.mRNA True 3975 mRNA 0.40 15 4263929 4272171

Neighbor

gene id symbol gene type direction distance location
CI01000016_04226585_04232287 NA coding downstream 31642 4226439 ~ 4232287 (-)
CI01000016_04181435_04188590 FLOT1B, FLOT1, FLOT1A coding downstream 75339 4181263 ~ 4188590 (-)
CI01000016_04084854_04101874 PIANP coding downstream 161976 4084724 ~ 4101953 (-)
CI01000016_04044171_04047247 TRIM108 coding downstream 216624 4044015 ~ 4047305 (-)
CI01000016_03921124_03930996 NA coding downstream 332767 3920055 ~ 3931162 (-)
CI01000016_04277441_04297655 NA coding upstream 4787 4276958 ~ 4298217 (-)
CI01000016_04300720_04301736 NA coding upstream 28478 4300649 ~ 4303507 (-)
CI01000016_04333323_04333836 NA coding upstream 60702 4332873 ~ 4333836 (-)
CI01000016_04370577_04377413 NA coding upstream 97871 4370042 ~ 4378117 (-)
CI01000016_04385978_04389107 NA coding upstream 113551 4385722 ~ 4390070 (-)
G96810 NA non-coding downstream 80962 4182501 ~ 4182967 (-)
G96792 NA non-coding downstream 141554 4120516 ~ 4122375 (-)
G96793 NA non-coding downstream 143578 4118297 ~ 4120351 (-)
G96789 NA non-coding downstream 195375 4068353 ~ 4068554 (-)
G96788 NA non-coding downstream 198048 4065535 ~ 4065881 (-)
G96758 NA non-coding upstream 50234 4322405 ~ 4367971 (-)
G96872 NA non-coding upstream 96208 4368379 ~ 4368688 (-)
G96857 NA non-coding upstream 129553 4401724 ~ 4413705 (-)
G96909 NA non-coding upstream 209778 4481949 ~ 4482313 (-)
G96912 NA non-coding upstream 213711 4485882 ~ 4486133 (-)
CI01000016_03647744_03675574 NA other downstream 598616 3647653 ~ 3675585 (-)
G95070 NA other downstream 1278288 2985260 ~ 2985641 (-)
G94786 NA other downstream 1987654 2270836 ~ 2276275 (-)
CI01000016_04921091_04922518 NA other upstream 640537 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 1053348 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 1140088 5412248 ~ 5415906 (-)
G97341 NA other upstream 1886815 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 4616662 8888833 ~ 8894737 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010474 abhd16a coding NC_007127.7 CM002900.2 10477533 ~ 10516970 (-)