CI01000016_04277441_04297655


Basic Information

Item Value
gene id CI01000016_04277441_04297655
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 4276958 ~ 4298217 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_04277441_04297655.mRNA
ACCCCCCTCATCCCTCCCAGTGAACCTCTTAGGACACACACGCTCATTCCACTAAAAGAAAAGAAGCCTTTCAGTTACTTCATCATCTGATGTTTTTCTGCCTCAAATGATAAAGTATCTGCATGTCTTAGAAACACTCAGTAAGTATCTCATTCTAAAAGAAGAAATTTTCTTTATGATATTGAAAATAATAATATTAACAATTTCATCTCATCCCAAATTTGTAGGGGGCACATCCCTCTGTCCCCCTAACCCAAGCTCTCAATTTGATTCAATTCTTATTTGTTTCTGATTCGTTTGGGTATATTGCAGTTTTAATGTCCATTTTATGTACTTATGTAAAAAATTATTTTCTGCTGATGCTAAAAATTATACAGGGCACTGTATATTTTTTGTCATTTTTGGCCTGCTTTGGTTGTACAGAATAGAGCAGCTTGAACATTCTACTAAATAGGCCTATCTACTTTTATATTTTATGGAAAATGAAAGTGAATGTGGAACATGAGAGTGAAATGATGACAAATGTCATTTTTGGGTGAACTAATCTACTAATTTAAAGTTCATGACTAACCTAAGCTCAGTGAATATGGAGCCAACCAACCAGACAGAAGAGCTACAGCATTCCAAAAACCTTCAGGGTTGCGATGTTAATCATAAAACAAACTGGATGGCATTCTGTCTAGAGGGGCCGAACACTCATCATGTCCTATTCCTTTTTATGCCATTTGGCTTCTTTTTAAAAGAGGGCAGATCTGTGGTCATTTTCCCTATGAGTAGACATGACCTACTACAGCAATCTGGCAACATTCAAAATTCCTATATCAATCTGGCAACCACATACAACTATTCAGAGCAACTGGCTACTGGCCCCTGGAGGGTCACTGATCTCCCAGCATGCAGTTGGACAAGGGGATGCATAAAAACAGGAACAGTTTCACCACAAGATCACATGGCACATTTCAAAGTAGATGTCTTTCAGTTCTGTCTACTGCTACACCTCCTCCCATGCTCTTTCGCCGGCTCAGACGCTAATAAACAGCATGGCCTTGAGGTCAGGGTGAGGTGGGGTAACGTATTAAATGATGTGGTCATGGTACGTGAGGACACATCTGTCACCCTATCCTGCTTTGATTCACCACCCACATCTTCTGTACTGGTCACCTGGAAAATGATGTCAGCAAAGGAGGATCGCTGGTCATATTTGTTATCAGCCAGCTGCATCGATGGACAAACAGATGGACGCAGTAGCAGAGTGTTTGGAGGCAGAACTTTTGAGATCTCTGCAGATGCTTCTCTCATCTTCAGGGCTGCAGCAGCTGTTCAAGGACAATACTCCTGTGTGATAGAACAGAATGACAAGAAACTACAGGAGAGGATCGTTCTACTCGCTCTGATTAAATGCATTCTCTCGCTCTCTTTTGCAGTAACTGTCACTCCCACGCCCCCTGTCACAGTGGACAGTACTCTGAGACTGGCAGCTCAGGTGTCTCCCGCCTCCGTGGCTGCCTGGGGAACGTGGGTGTCTTCCTCGGGTGAACAGCTATACACTGAAATCTCCCATGACAAGGGCAGTCTGCTCAGCAAGCTGCCTCGCATCACCAGTAAAGACAAAGGAGTCTATACCTGCAGAATCCGTGTCCATGGTAACAATGCCACGTCTGTCTCGGAGCACAGGGTGAATGTGACAGTGAACGGGGTCTCAAGGTCTTTGGCAGCCCTCTCTCGTTCACCGGTCACTCTAACCTGTCCCCAAATACTGGGAGACTATGTGCTGCTCTACTGGGAGTATCCTGATTCAAAAAGAATGGAGCTCATATTCCAGTTTGACCGCTGGAGGAGGAGTTCCATCAGCCAGACCAAACTCAAACAACTCCATTTGATAGACCCCGCCTCCCTGGCTGCTGCTGGGAATTTCTCCTTCCTATTACGCCCAGCTCTGAAGGATGGAGGACTCTATTTGTGCGAGGTCTTCCTGGATGACAAGGCTTTCAGCCAAGGCAACAGACTGAGTGTTTTACATGGAAATGCCAAGTCATCCCGCAGTGCTCTGGATCTGAGTTGTACGTACTCAGAACGATCTCAAGTCAAAGTTGTAAGATGGTCATATGTTCAGGATCCCAGTCGCCTTCTGCAATCAGCTGCTGTTTTGGGCCGGATCACAACCTCTGTAGCGCTTCCTGTGACCAATGAGACGGCTGGACTTTATGCCTGCACTCTGTGTCTGCAAAATGGAAACTATATACAATATATGCACACCGTCACAATGGCCAATATAGATCCAACAGTTTCTCCAAGCCCTGCACTGCCACCTGCAGCAGGAGATGTTTCAGGACCCTCTTATCCTTCCACCTTCTCATTGCTCCTATTTCTGATACCCATGATTGCCGTAGCTGTTGGGGTGTTGCTATGGAGACAGGGTTATTGCGTCACCCGCCGAAGTGTCGAGCAATCGCTGTCTCACCACTCCAAAGAGGTGGAGAACATCTATGAAAATCCTGACGATCTAAGACAGGATCTTAAGCCAACGCGTGAAATGGATGTATATGAAGAATTAGACAGACACAACCAGTGCTGTGGTTGAGTTTATTATACTTATACAGTGGATGTTGAGATAAAACAACTTTATTTGAAATAAAATTTTATATATATACATGTGTGAAATGGTGTAGCCTATATGTGTGACTTTTGTATTCACTTATGACAGTAAATTGTTCTTGTTGTTACTATAAAAATGACACTTCTTCAAAAAGTATCTGAAGTTTTTAGAATCTTTTTATTATATCAGCTTTTCTTTCTTATTGTTACCCCTTTTTGATAGTTTTATTGTAATGTAAATAATAGTGCACTGGAATGGTACAGGTAATCTTCTGCCAGGACATTTTCTATTAAGTTTATGGATATTTCTTATAACCCTAAAACACAACACAATATAATACATAATTCAAAATTCCTGGAAAACACCTGTGAGTAATCAATACGGAAAATTCATTTATATTAACACAGTACATTGGACTCTATTTTTATTGACTTTTTCTTTTTTTGTATTTTTTTTTTAGGTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_04277441_04297655.mRNA True 3064 mRNA 0.42 12 4276958 4298217

Neighbor

gene id symbol gene type direction distance location
CI01000016_04264738_04270463 ABHD16A coding downstream 4787 4263929 ~ 4272171 (-)
CI01000016_04226585_04232287 NA coding downstream 44671 4226439 ~ 4232287 (-)
CI01000016_04181435_04188590 FLOT1B, FLOT1, FLOT1A coding downstream 88368 4181263 ~ 4188590 (-)
CI01000016_04084854_04101874 PIANP coding downstream 175005 4084724 ~ 4101953 (-)
CI01000016_04044171_04047247 TRIM108 coding downstream 229653 4044015 ~ 4047305 (-)
CI01000016_04300720_04301736 NA coding upstream 2432 4300649 ~ 4303507 (-)
CI01000016_04333323_04333836 NA coding upstream 34656 4332873 ~ 4333836 (-)
CI01000016_04370577_04377413 NA coding upstream 71825 4370042 ~ 4378117 (-)
CI01000016_04385978_04389107 NA coding upstream 87505 4385722 ~ 4390070 (-)
CI01000016_04422169_04424433 RABAC1 coding upstream 123778 4421995 ~ 4424433 (-)
G96810 NA non-coding downstream 93991 4182501 ~ 4182967 (-)
G96792 NA non-coding downstream 154583 4120516 ~ 4122375 (-)
G96793 NA non-coding downstream 156607 4118297 ~ 4120351 (-)
G96789 NA non-coding downstream 208404 4068353 ~ 4068554 (-)
G96788 NA non-coding downstream 211077 4065535 ~ 4065881 (-)
G96758 NA non-coding upstream 24188 4322405 ~ 4367971 (-)
G96872 NA non-coding upstream 70162 4368379 ~ 4368688 (-)
G96857 NA non-coding upstream 103507 4401724 ~ 4413705 (-)
G96909 NA non-coding upstream 183732 4481949 ~ 4482313 (-)
G96912 NA non-coding upstream 187665 4485882 ~ 4486133 (-)
CI01000016_03921124_03930996 NA other downstream 345907 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 611645 3647653 ~ 3675585 (-)
G95070 NA other downstream 1291317 2985260 ~ 2985641 (-)
G94786 NA other downstream 2000683 2270836 ~ 2276275 (-)
CI01000016_04921091_04922518 NA other upstream 614491 4918975 ~ 4922518 (-)
CI01000016_05325805_05330265 COX6B2 other upstream 1027302 5325519 ~ 5332874 (-)
CI01000016_05412782_05415867 NA other upstream 1114042 5412248 ~ 5415906 (-)
G97341 NA other upstream 1860769 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 4590616 8888833 ~ 8894737 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010475 g6fl coding NC_007127.7 CM002900.2 10522596 ~ 10547781 (-)