CI01000016_05205373_05206602


Basic Information

Item Value
gene id CI01000016_05205373_05206602
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 5205331 ~ 5206602 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_05205373_05206602.mRNA
TCATGCCCAATCGGAGCAGAGCAAGAGATGAAAAGATGAGGGCAAAACAAATCCAGAGGCACACTGGAAAATGGCCATTGAGACATCCAGACATCGGCCAATTGAATCTTCAATGTGCCTGTTGTTGTCTGATGCTTGTCATTTTGAGAGCTTGGCGAATTCAGTTTGCATTGTTTTTCTTTTTTTATGCCAATCTCAATTTCTCTAAAATGACAAAAACACCATGTCAGTGTAAAGATGATGTATGGGTTGTATTTCCGGATTGGCTCCATGTAGTGTTTAGTAGAATTGCTGCTGTATGTTCAGCTCCATCTCTCAAAAGCCCTAATGTCTCTGCCCTGAAAGAAAATACTGCCGTTTGTAGATGCTGATCTGTACATAATGTACATACTTTATCTTGTGAGAAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_05205373_05206602.mRNA True 413 mRNA 0.39 2 5205331 5206602

Neighbor

gene id symbol gene type direction distance location
CI01000016_05170621_05189845 LPCAT3 coding downstream 15486 5169714 ~ 5189845 (-)
CI01000016_05151082_05166013 CLSTN3 coding downstream 39318 5151057 ~ 5166013 (-)
CI01000016_05131457_05146340 PEX5 coding downstream 58991 5130748 ~ 5146340 (-)
CI01000016_05124385_05128589 CDCA3 coding downstream 76356 5124259 ~ 5128975 (-)
CI01000016_05086983_05098757 UBP5, USP5 coding downstream 106574 5086813 ~ 5098757 (-)
CI01000016_05208242_05218239 NA coding upstream 817 5207419 ~ 5219816 (-)
CI01000016_05233964_05243756 NA coding upstream 27054 5233656 ~ 5244368 (-)
CI01000016_05249001_05286683 EPHB6 coding upstream 40958 5247560 ~ 5286683 (-)
CI01000016_05313099_05322439 SLC2A3B coding upstream 106201 5312803 ~ 5322947 (-)
CI01000016_05325805_05330265 COX6B2 coding upstream 118973 5325519 ~ 5332874 (-)
G97012 NA non-coding downstream 518 5192792 ~ 5204813 (-)
G97139 NA non-coding downstream 13903 5191026 ~ 5191428 (-)
G97135 NA non-coding downstream 81855 5123080 ~ 5123476 (-)
G97045 NA non-coding downstream 131803 5067684 ~ 5073528 (-)
G97037 NA non-coding downstream 234551 4969389 ~ 4970780 (-)
G97148 NA non-coding upstream 134437 5341039 ~ 5341800 (-)
CI01000016_05374626_05378364 NA non-coding upstream 138799 5373845 ~ 5386465 (-)
G97160 NA non-coding upstream 195541 5402143 ~ 5402369 (-)
G97165 NA non-coding upstream 205053 5411655 ~ 5411920 (-)
G97180 NA non-coding upstream 346693 5553295 ~ 5553986 (-)
CI01000016_04921091_04922518 NA other downstream 281927 4918975 ~ 4922518 (-)
CI01000016_03921124_03930996 NA other downstream 1274280 3920055 ~ 3931162 (-)
CI01000016_03647744_03675574 NA other downstream 1540018 3647653 ~ 3675585 (-)
G95070 NA other downstream 2219690 2985260 ~ 2985641 (-)
G94786 NA other downstream 2929056 2270836 ~ 2276275 (-)
CI01000016_05412782_05415867 NA other upstream 205657 5412248 ~ 5415906 (-)
G97341 NA other upstream 952384 6158986 ~ 6159721 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other upstream 3682231 8888833 ~ 8894737 (-)
CI01000016_08926089_08945071 NA other upstream 3730187 8925960 ~ 8945229 (-)

Expression


Co-expression Network