CI01000016_09251602_09253351


Basic Information

Item Value
gene id CI01000016_09251602_09253351
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9251412 ~ 9253351 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09251602_09253351.mRNA
AATTTGAGATTGGAGCCTGCTGAATACTGGTACAATAAAACACCACCAACATATCCAGAAGTAGAGAGCACATTTCATTCACCTGAGTTAAGGATTGTGCTGCTGGGAGCTTCTAGTGTTGGAAAGAGTGCAACAGGAAATGTAATACTGGGCAGAAAGGCTTTTAAAGTGACCAGAACCAGAGCGAGTGAGATACAGAGAGGAAGAGTAGAAGACAGAAACATCTCGGTCATCGACACTCCAGGTTTCTTCACCACTGAACTGACTGATGAAGAGCTGCAGAATGAAATGATGAAGAGTGTTTCTCTTTGTCATCCTGGTCCTCATGTGTTCCTGCTGATCATCAACCTAGAAAACATGAAAGAGGAGGAGAGAAAACTTGTGAAACAAATTCAGAAGTACTTTGGACCACAAGGTTTTAAGTTCACCCTGGTTCTGTTCATTGGAAGAGAACAACTGTCCAACAAAGAATGGATGGTCTTTATGCTTTGTACAAAATTTCAGGAACTAGTCAGACACTGCAGAGATAAATATCATGCAATCAGCAGTGTACGTGAAATTAATCCAGCTCACATCACAAAGCTTGTACAGAAGATTAATGAAATCATCAAACAGAATGATGACCAGTATTACAATAATGAGATTTACCTAAAGTCTCCAACAAAGATCAGAAAAGAAAAAGCAAAAACTGGAGGAAGAAAAGGAGGACAGAGGACAACACAGAGAAAGAGACAAAACAAGAGCAAGTAAAACAGTGCAAGAGACATTTAAATGTGTAATAGAAGAAAACAAAGCGAAGTATATCTCATGCGAGAAGAACAGAGAAAACTCAGGTAGAAGAAGAATTTGTTTTTCAAGAAAACATGAATGCTGAGGCAAGGGATAGTAGCTCATTAGGAAGATCACTGTGATTCTCGTTCGAAAGGATGACAGAATTAAA

Function

NR:

description
GTPase IMAP family member 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09251602_09253351.mRNA True 940 mRNA 0.39 2 9251412 9253351

Neighbor

gene id symbol gene type direction distance location
CI01000016_09224593_09226660 NA coding downstream 24752 9224467 ~ 9226660 (-)
CI01000016_09212039_09212358 NA coding downstream 38242 9211997 ~ 9213170 (-)
CI01000016_09185530_09205841 NA coding downstream 45378 9185404 ~ 9206034 (-)
CI01000016_09164404_09171973 CCDC106A, CCDC106 coding downstream 76654 9164404 ~ 9174758 (-)
CI01000016_09129190_09132103 NA coding downstream 119309 9127608 ~ 9132103 (-)
CI01000016_09376209_09382250 TAPBPL coding upstream 122858 9376209 ~ 9382250 (-)
CI01000016_09384358_09401878 GRHL2A coding upstream 130811 9384162 ~ 9401878 (-)
CI01000016_09410080_09416286 NCALDA, NCALDB, HPCAL1, NCALD.L, NCALD coding upstream 156555 9409906 ~ 9417767 (-)
CI01000016_09475913_09487996 NA coding upstream 221646 9474997 ~ 9488292 (-)
CI01000016_09510177_09512196 ID4 coding upstream 256308 9509622 ~ 9512428 (-)
G98683 NA non-coding downstream 16979 9233904 ~ 9234433 (-)
G98783 NA non-coding downstream 75495 9175182 ~ 9175917 (-)
G98666 NA non-coding downstream 93140 9156669 ~ 9158272 (-)
G98675 NA non-coding downstream 144186 9105394 ~ 9107226 (-)
G98778 NA non-coding downstream 147954 9103223 ~ 9103458 (-)
G98692 NA non-coding upstream 1600 9254951 ~ 9255328 (-)
G98789 NA non-coding upstream 2284 9255635 ~ 9255882 (-)
G98831 NA non-coding upstream 57640 9310991 ~ 9311210 (-)
G98834 NA non-coding upstream 60224 9313575 ~ 9314005 (-)
G98802 NA non-coding upstream 64220 9317571 ~ 9324495 (-)
G98679 NA other downstream 11483 9234996 ~ 9239929 (-)
CI01000016_08926089_08945071 NA other downstream 306183 8925960 ~ 8945229 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other downstream 356675 8888833 ~ 8894737 (-)
G97341 NA other downstream 3091691 6158986 ~ 6159721 (-)
CI01000016_05412782_05415867 NA other downstream 3833195 5412248 ~ 5415906 (-)
G98691 NA other upstream 2751 9256102 ~ 9257611 (-)
G99178 NA other upstream 561010 9814361 ~ 9814955 (-)
G100190 NA other upstream 797817 10051168 ~ 10052389 (-)

Expression


Co-expression Network