CI01000016_09510177_09512196 (ID4)


Basic Information

Item Value
gene id CI01000016_09510177_09512196
gene name ID4
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9509622 ~ 9512428 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09510177_09512196.mRNA
ACTGTGCGTTCACACTCAGAGAGGAGATGTGGTCAGGATAGAACAGCGCTCCTTTTCTTGCGTACACCAAATTGCGTTTTTACCCGAAACCTCTTGTTGCGTCCCGCGCGCGTTTGTTGTTGTTTTTTTCCCCTTCTCGTTTAGCTCTTTGTGGTTTTTATTTATTACAATGAAGGCCAGCGCACCAGTTCGCCCTCATAAGGTTTCTTCTGGCTGCAGTCAGCTCTCCTTGCGTTATTTGACGGAGCCCAGCCGATGCAAAATGGAAGAGGAGGATCTTTTCTGTCTGCAGTACGACATGAACGACTGTTACAGCCGACTCAAGCGCCTGGTGCCCACTATTCCGCAGGATAAGAAAGTCAGTAAAGTGGAGATCCTCCAGCATGTCATTGACTATATCCTGGACCTGCAGCTGGCGTTGGAGACGCACCCGGCTCTCCTGAAACAGACGAGCCCACCCGCCTCCACACGGACCCCTCTCACACAAATCAACACAGAGCAGGACGCTGGCAGCCGCTCGAACCCAGCTGTACGTTGCGCAATAACGGTCTTCCTAACAGAGGGTTTAGTTGGTAGCGTCCGGGACGTTAGCTGCGTGTGTGAGGTGTGCACTGAACCCATCCAAAGCCAAGCCCAGCTTCACCAGGGAATCCAACACACATCAGGCCCAATCGCAGGGGAGCAGCACTGAAACTAATAGCTACTAAATCATAATATGTAAACATTTTAACGTCAGCTGTCAAAGATGCGGTGAAGCCAGCCAGATTTCTCTTGTGCCCATTCTGTTCTCTCTCCGTGGGGGAAATGCTGAATTTGGACAGAGAATCCAATCCCCCCTCCTTCACACCTCTGAAATTTCAATTTTAAAGACATCTCAGATAAAAACCTGCATCTAATTTTACTAAAAACCATCAGACTGTAAAGCTTTATGAATCAAAATGAAAACATCTGACATCTATTGTTAGGTGATTTGTGCTGAACAGGGATTTCCCTGCTGTTTAATATTGTAAAGAACTACGATAAGTGTTGACTTAAATAATGCTGTACATAACAAGGAGGATGTTCTATAAATGTATGTGTAAGAGAATATATGTTCAACCAGCTGATTGTAATTATTCTAAAATATTTTTTATCAAAAATGTTTCGTTCTGTAAATATTGTGTTTTCACATAAGTGTAGTGAATGATTACATGATGTTCTGCTAATAAA

Function

symbol description
id4 Predicted to enable protein dimerization activity. Acts upstream of or within atrioventricular canal development; atrioventricular valve development; and regulation of Wnt signaling pathway involved in heart development. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in central nervous system; heart; and retina. Orthologous to human ID4 (inhibitor of DNA binding 4, HLH protein).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K17695 ID4; DNA-binding protein inhibitor ID4

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09510177_09512196.mRNA False 1209 mRNA 0.44 3 9509659 9512365

Neighbor

gene id symbol gene type direction distance location
CI01000016_09475913_09487996 NA coding downstream 21367 9474997 ~ 9488292 (-)
CI01000016_09410080_09416286 NCALDA, NCALDB, HPCAL1, NCALD.L, NCALD coding downstream 91892 9409906 ~ 9417767 (-)
CI01000016_09384358_09401878 GRHL2A coding downstream 107781 9384162 ~ 9401878 (-)
CI01000016_09376209_09382250 TAPBPL coding downstream 127409 9376209 ~ 9382250 (-)
CI01000016_09251602_09253351 NA coding downstream 256308 9251412 ~ 9253351 (-)
CI01000016_09638800_09651752 CEP76 coding upstream 126227 9638592 ~ 9651752 (-)
CI01000016_09654611_09661197 NA coding upstream 141137 9653502 ~ 9661197 (-)
CI01000016_09739013_09746676 NA coding upstream 226648 9739013 ~ 9746676 (-)
CI01000016_09959197_09962175 NA coding upstream 445557 9957922 ~ 9963244 (-)
CI01000016_10025722_10027148 NA coding upstream 513137 10025502 ~ 10027259 (-)
G98887 NA non-coding downstream 15720 9493643 ~ 9493939 (-)
G98885 NA non-coding downstream 19853 9489565 ~ 9489806 (-)
G98878 NA non-coding downstream 29032 9480394 ~ 9480627 (-)
G98853 NA non-coding downstream 112140 9356362 ~ 9397519 (-)
G98898 NA non-coding upstream 1400 9513765 ~ 9513998 (-)
G98901 NA non-coding upstream 6014 9518379 ~ 9518655 (-)
G98906 NA non-coding upstream 10663 9523028 ~ 9523298 (-)
G98914 NA non-coding upstream 22157 9534522 ~ 9534762 (-)
G99078 NA non-coding upstream 28660 9541025 ~ 9541287 (-)
G98691 NA other downstream 252048 9256102 ~ 9257611 (-)
G98679 NA other downstream 269730 9234996 ~ 9239929 (-)
CI01000016_08926089_08945071 NA other downstream 564430 8925960 ~ 8945229 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other downstream 614922 8888833 ~ 8894737 (-)
G97341 NA other downstream 3349938 6158986 ~ 6159721 (-)
G99178 NA other upstream 301996 9814361 ~ 9814955 (-)
G100190 NA other upstream 538803 10051168 ~ 10052389 (-)

Expression


Co-expression Network