CI01000016_09654611_09661197


Basic Information

Item Value
gene id CI01000016_09654611_09661197
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9653502 ~ 9661197 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_09654611_09661197.mRNA
GAAATCCGTAACCAGTCCCAGGAGTGTGCCTGCAAAGTGGCAAAGTTCCCAGAAAATCACAATAGGAATAGATATAGAGACGTCAGTCCCTATGATCACAGTCGGGTGAGATTAGAAAATTCAGAAAATGACTACATAAATGCGAGCCTAATTACCATGGAGGAGGCCCAGAGAAGGTACATATTGACACAGGGTCCCCTGAGGAACACTTGTGGTCACTTCTGGCTAATGATTTGGGAACAACGTTCCAAAGCAATTATTATGCTTAACAGAGTTATAGAAAAAGGCTCGGAAAAGTGTGCACAGTACTGGCCATCAAAGGAGGAACGAGACATGGATTTCAGTGACACTGGGTTTATGGTGACTCTGGTGTATGAGGATGTCGAACCCAATTACACAATAAGACTATTAGAACTTCAAAATGACAAGACAGGAGAAACCAGAGAGATCTACCATTTTCATTACACAACGTGGCCTGATTTTGGTGTACCAGAGTCTCCAGCATCATTCCTCAACTTCCTTTTCAAGGTTCGAGAGTCTGGCTCTTTGGGGCCAGAGAACGGACCTGCGGTGGTCCACTGCAGTGCAGGAATAGGGCGGTCTGGGACCTTCTCATTGGTTGACACCTGCCTTGTCTTGATGGACACGAGGAAAGACCCTTTGTCTGTGGACATACAGAAGGTTTTGTTAGATATGAGAGAGTATCGAATGGGTCTTATCCAAACCCCAGATCAGCTTCGGTTTTCATATATGGCAGTCATAGAGGGCGCAAAGAGCATCCTGAGAGAGTCTACTCTACAAATATCAAGCATGAAGCAGCCTAAAGAATGTCAGGAACCAGAAGCTTATTTAGTTTCATCTTCTCAAAGCCCCATCTGGAGTTCAGAGAAACACAACGGACAGTCTGACTCTTGTACAGAACCACAAGATCCAGGAAGAGAACGAGACAGGATAGAGTCACCAAAGGAAGAGCGGCTTACAGAGTCAAAAACATTAGGCCTACGCAAGCGGAACCGCGAGGAGCGAATAGCCAGCACGGCACAGAAGGTGCAGCAAATGAAGCTGAAACTGAGCGATTCGGAGAAAAAGAAAGAGAACTGGCAGTTCTGGAGACCAATTCTCCTAAATGTCGGTGCTGGTGCCGCTGTAGCACTAGGACTGTGCATGTGCTGGGCCTTTCTGTCCCAGTAATGCCATTTTATCCAACAGATTCCTCTTTTATTTTGCCCAGGGACCCAAATTATGGTACTCATATTAGTAGGTGCTTGGATGTTTTTAGATAAGGGACAACATGTAGAATGATCGTGTTTACAAGCATTCAATCCGGGACATTCTACATGATTTATTGAATGTTTGTGTCGTGGTTATTACAGTGTAACGAATGATGTAGTTACATTGTAACTGCTATTGTAATTCCATCATGGTAAGTTCTTGAGGCCTAGCAACTTTCACTGTACAGTATTTTGTCTCAGTTTATCTGCGGAGCAATGTTAAATGGTATGGAAGCTTGTTTCTGCCATGGAATAAAAAAGAAAAAAGGTAATTGTGAGTTTATTGCACAATTCTGACTTTTTTTTTTTTTTAAATTGCAACTTTAAATCTCGCAATTCTCACTGTATTGTGAGTTTATGTCAAAATTCTGAGAAAAAAGGTCAGTATGTTGGATTTAATCTTTATCAGAATTGCAACTATTTCATAATTTATCGCAGTTCTGGCTTTTTCAGAATTTTCAGTTATAAAGTCAATTGTGAGGAAAAAAGTCTGAATTGTGGCTTTATTTCTCAGAATTGCTACTTTAAATCTCGCAATTCTGACTCTATAACTCACTATTTTTATATCACAATTCTGAGAAAACGGTTAGAATTGTGAGATATGATTTTGCAATTGCAAGGAAAAAAGTCATTTGCCAGACATAAACTTGCAATTGCAAGTTCTAAAGTCAGAATTGCGGGATATACAGTAATCTCACAATTGTGAGAAAAAACTCTGAATTGTGGCTTTATTTCTCAAAATTGCTACTTACTTTATAACTCACTAGTGAGTTTATATTACAACTCTGAGAAAAAAAGTTAAAATTGTGAGATAAAAAGTTGCAGTTACCTTTTTATTTATTTTTTTTATTCCCTGTCGGAAACAAGCTTCCATAAAATAGACCCCCACCGGTCCAACTGAGTCAGTTTATTAAATGCTTCTGTCTTCAAGTTTCCGCATGGATATTCATAGGGTGACTCATTTGTTTCAGTAGGTCAAAGCCCAGTGAGTTTCCGTACATGCACATCTCAGGATCTTCTAGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_09654611_09661197.mRNA True 2300 mRNA 0.40 8 9653502 9661197

Neighbor

gene id symbol gene type direction distance location
CI01000016_09638800_09651752 CEP76 coding downstream 1750 9638592 ~ 9651752 (-)
CI01000016_09510177_09512196 ID4 coding downstream 141137 9509622 ~ 9512428 (-)
CI01000016_09475913_09487996 NA coding downstream 165210 9474997 ~ 9488292 (-)
CI01000016_09410080_09416286 NCALDA, NCALDB, HPCAL1, NCALD.L, NCALD coding downstream 235735 9409906 ~ 9417767 (-)
CI01000016_09384358_09401878 GRHL2A coding downstream 251624 9384162 ~ 9401878 (-)
CI01000016_09739013_09746676 NA coding upstream 77816 9739013 ~ 9746676 (-)
CI01000016_09959197_09962175 NA coding upstream 296725 9957922 ~ 9963244 (-)
CI01000016_10025722_10027148 NA coding upstream 364305 10025502 ~ 10027259 (-)
CI01000016_10089136_10135299 NA coding upstream 427519 10088716 ~ 10135299 (-)
CI01000016_10228314_10299064 ULK4 coding upstream 567117 10228314 ~ 10299064 (-)
G99119 NA non-coding downstream 49031 9603846 ~ 9604471 (-)
G99101 NA non-coding downstream 70893 9582138 ~ 9582609 (-)
G99085 NA non-coding downstream 80051 9573167 ~ 9573451 (-)
G99082 NA non-coding downstream 81993 9571223 ~ 9571509 (-)
G99073 NA non-coding downstream 92860 9560160 ~ 9560642 (-)
G99156 NA non-coding upstream 87193 9748390 ~ 9749073 (-)
G99087 NA non-coding upstream 128114 9789311 ~ 9793229 (-)
G99173 NA non-coding upstream 137755 9798952 ~ 9799672 (-)
G99180 NA non-coding upstream 144119 9805316 ~ 9805914 (-)
G99189 NA non-coding upstream 164693 9825890 ~ 9835996 (-)
G98691 NA other downstream 395891 9256102 ~ 9257611 (-)
G98679 NA other downstream 413573 9234996 ~ 9239929 (-)
CI01000016_08926089_08945071 NA other downstream 708273 8925960 ~ 8945229 (-)
CI01000016_08893013_08893496 NPPCL, ANFC1 other downstream 758765 8888833 ~ 8894737 (-)
G99178 NA other upstream 153164 9814361 ~ 9814955 (-)
G100190 NA other upstream 389971 10051168 ~ 10052389 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location