G93216


Basic Information

Item Value
gene id G93216
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 284593 ~ 284850 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106082
ATACCACTAAGTTGACCGTGGAATATTTAGTAGTGAGGAAATTTCACGAATGGACTTATTGCACAGGTGGCAACCTATCATGGTACCACACTTGAATTCACTGAGCTCCTGAGAGCGACCCATTCTTTCACAAATGTTTGTAGAAGCAGTCTGCATGCCTAGGTGCTTGATTTTATACACCTGTGGTAATGGAAGTGATTGGAACACCTGAATTCAATGATTTGGAGGGGTGTCCCAATACTTTTGGCAATATAGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106082 True 258 lncRNA 0.42 1 284593 284850

Neighbor

gene id symbol gene type direction distance location
CI01000016_00229474_00234707 KCNV1 coding upstream 49678 229422 ~ 234915 (+)
CI01000016_00206576_00207640 PAQR7B coding upstream 76658 206576 ~ 207935 (+)
CI01000016_00200989_00201760 STMN1, STMN1A, STMN1B coding upstream 82454 200721 ~ 202139 (+)
CI01000016_00116237_00122376 NA coding upstream 160819 115163 ~ 123774 (+)
CI01000016_00104268_00104615 NA coding upstream 179544 100537 ~ 105049 (+)
CI01000016_00294886_00298452 NA coding downstream 10036 294886 ~ 299161 (+)
CI01000016_00318676_00446341 NA coding downstream 33826 318676 ~ 446341 (+)
CI01000016_00496095_00506965 NDUFAF6 coding downstream 211245 496095 ~ 507033 (+)
CI01000016_00540871_00541608 PLEKHF2.L, PLEKHF2 coding downstream 255782 540632 ~ 541723 (+)
CI01000016_00569502_00581271 NA coding downstream 284652 569502 ~ 581499 (+)
G93215 NA non-coding upstream 160 284200 ~ 284433 (+)
G93149 NA non-coding upstream 33019 182328 ~ 251574 (+)
G93143 NA non-coding upstream 96922 176999 ~ 187671 (+)
G93086 NA non-coding upstream 129913 153963 ~ 154680 (+)
G93133 NA non-coding upstream 154433 129313 ~ 130160 (+)
G93224 NA non-coding downstream 24439 309289 ~ 368179 (+)
G93157 NA non-coding downstream 165763 450613 ~ 457007 (+)
G93161 NA non-coding downstream 175590 460440 ~ 463979 (+)
G93290 NA non-coding downstream 332582 617432 ~ 617962 (+)
G93300 NA non-coding downstream 349252 634102 ~ 634319 (+)
G93406 NA other downstream 620550 905400 ~ 927532 (+)
G95439 NA other downstream 3577325 3862175 ~ 3862305 (+)
G95648 NA other downstream 3987786 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 4549708 4829592 ~ 4837457 (+)
G95792 NA other downstream 4935030 5219880 ~ 5225941 (+)

Expression


Co-expression Network