G93157


Basic Information

Item Value
gene id G93157
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 450613 ~ 457007 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106007
CGCAAGTCGACTTGCGCATTCTGCATACGGTTGTCCGCCAGAAGCTAGTTATTTGAATTTATAAAGTTTTAAATATGGATTTTTTTTTTTTTTTTTTGTTTGTATTAAAACATTTATTGAGAAGAGAGAATACATACTGACAAATAGTAGGTTTCAAGACATATGAAATGAACAATTTATTTGCAAATTATACTACCCATACAAAACAGTTTGTGTATGACATGTATCCAAAACATATCAGTACAAGAAAAAGATAAATAAACAATGCTAAAACCCTACACTTTTGGCAAAGTGCTGTATTATTCCAGTAAACTAAAAATCAACCAAAGCATAGTCTAAAACTTAGCAATGCCACAGAAAATATTCTTCACACATTAAACACAGAAAACGTTTGCTACATTTCGTGTAAAAAGTTGACAGAGCAAGTGGCTCACAGAGACAAGGTATTCCTCTGTGCATAGTAAAATTACATTTGTTTGTGTCCCTTTGGACAAATTTCAAGTTCTTCACGGATGCATTGTCATACTGTTCACCTGGAAGGCACATGATCCCCAAATGCAATTCAAGGCGAAATGAAATCCCTGTTTTGAATACCAAAAAAATCAGGCATCTACTGACATAGGGAAAGAGGGCCTCTCCAGTATTACTCAAGGAATATGAAGAGAACCTAACGTCCCTTGCTTTCCCTTCGTCCACAAAAAAGAAAAAGAAAAATGTCAGAAAATGCAATATACTGCTCAGCGCAGACTGCAGCAAGCAAAAGAAAAGAAGAGAAGCTGTAGTTGTTTTCCTTGAGTTGCTCATGCATATAATATGCATTCGGCTGAATGTCAGAGTTAATGAATTCAGTTTCATTCATTTAGGGGAGACATTTACCTTGGCAGTGTGACCGGAAATTTACAACACCAGGTCTCGCGTGATAAAGGAATAAAGAGTAACAAACATAACCTACGAAGAATTTTTAGTTTTTGCTACTTTAAATATGCCGCTCAGCAATATACAATGTGTAACTAGTCAAATAAAACATGAAAAAGGCATATAACACAAAAAGTCACTACATTGATAAAACTAAAAAAAACAAAAAAAGATTAAAATGCTAACAGTTTCACTCCGTCGTCAAAGTTTTTAACAGTCAATTAAGAGAAAGAGTTTGTTTCACAGTCCTCGGAGGAGCAAGCATTTTGCTTTCATTCAAAGTGTGAGATGCACGTTATGTTAAAGATTTACATCAATTACAAATATTTCCACAAGGTAACATACACGTCGACAAAGTTAGAGGTTCTCCAGTATGTACAAAGACAGTTTACCATCTGCAAGTAATATGCATTCTTAGCAAAGAGCGAAGGTGAACAGTGATGACCCTGAGACATGTACTGCAGATATAGAGCAAACATGAAAAATAACATTACAACACTTTTTTTTGTTGGTTTTCTCACCTGTTGGAAAATTAGCACTACACAGTCATACATCAAATCAGTCACTAAAAATAGGAAAAAAACTACTTACATACATATCTACGCAGATAACACACATTCTTATCAACTTCATACTGATATGTAATATATATTCAATGTTTTTTTCTTTTGAAAATATTTTGGAAGTTTTTTAAATATATTTTATATATTTTGAAATTTACTATGGAAACAAGGCTTTTAGTGATAATAAACCCAGTATACTTTTTTAAAGAGAAAAAAAAACAAAGAGGAAGAAAGCACTGATCTACAGAGTCACAGGCAGGTTCCTTCCTAACCAGAAAAGTGCTGCTGATGATTTCATCACTGATGTGATTGAACTTAGTATGGCTTCAAAAAAGCAAAGAAAGCGTCAAGCTGCCTACTCATGATGCCTACAACATCATGCTCACTAGAACAAAACACTTGGTTATTCAACCTTCATGACATATAACATAAGACCGAACATAACAGATGGAGCTTATATAGGAAACACGTGACATGATGCAGACACATTCAGGTCGAGCGGAACCTGCCGTGAAGTAAAGTGACCTATGGCATTGATTCTAAAGGACTCCGTTCCTTCTGGCGAAAGACTAATTCTCCCAGTGTGGAGGGGGCGGCTTGCAGGGGAGGACGGGGGAGTGCAGTGGGAACCGTCTCAGTAGTTGTACTGCCTCTGTCCCGGCTGGTGAACGTAGCCTCCGGTGGCTTTGGCCTGTCTGGCTCCGCCTTCGCGCAGCAGGTTGAGGCGGCGAAGGGCGTTGCGAGACAGCTGCTGGCGCTCCACGTTGTCACGGATGCGCTGAGCCAGGCGGACGTTCTTGGTCTGCTCCAGAAAGCCTGCGTGAGCAGCGACCAGAGCGGCTGCGTAGCAGCCGGAAGCGTGACTTGGCCGACGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106007 True 2355 lncRNA 0.39 2 450613 457007

Neighbor

gene id symbol gene type direction distance location
CI01000016_00318676_00446341 NA coding upstream 4272 318676 ~ 446341 (+)
CI01000016_00294886_00298452 NA coding upstream 151452 294886 ~ 299161 (+)
CI01000016_00229474_00234707 KCNV1 coding upstream 215698 229422 ~ 234915 (+)
CI01000016_00206576_00207640 PAQR7B coding upstream 242678 206576 ~ 207935 (+)
CI01000016_00200989_00201760 STMN1, STMN1A, STMN1B coding upstream 248474 200721 ~ 202139 (+)
CI01000016_00496095_00506965 NDUFAF6 coding downstream 39088 496095 ~ 507033 (+)
CI01000016_00540871_00541608 PLEKHF2.L, PLEKHF2 coding downstream 83625 540632 ~ 541723 (+)
CI01000016_00569502_00581271 NA coding downstream 112495 569502 ~ 581499 (+)
CI01000016_00772375_00772848 NA coding downstream 315263 772270 ~ 772889 (+)
CI01000016_00885996_00887374 NA coding downstream 428989 885996 ~ 887478 (+)
G93224 NA non-coding upstream 82434 309289 ~ 368179 (+)
G93216 NA non-coding upstream 165763 284593 ~ 284850 (+)
G93215 NA non-coding upstream 166180 284200 ~ 284433 (+)
G93149 NA non-coding upstream 199039 182328 ~ 251574 (+)
G93143 NA non-coding upstream 262942 176999 ~ 187671 (+)
G93161 NA non-coding downstream 3433 460440 ~ 463979 (+)
G93290 NA non-coding downstream 160425 617432 ~ 617962 (+)
G93300 NA non-coding downstream 177095 634102 ~ 634319 (+)
G93301 NA non-coding downstream 182654 639661 ~ 639878 (+)
G93310 NA non-coding downstream 206997 664004 ~ 664235 (+)
G93406 NA other downstream 448393 905400 ~ 927532 (+)
G95439 NA other downstream 3405168 3862175 ~ 3862305 (+)
G95648 NA other downstream 3815629 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 4377551 4829592 ~ 4837457 (+)
G95792 NA other downstream 4762873 5219880 ~ 5225941 (+)

Expression


Co-expression Network