G93410


Basic Information

Item Value
gene id G93410
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 862104 ~ 868937 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106285
CACTGAACTAACATGAACAAACAATGAACATCTGTATTTTCATTAACTAACATTAACGAAGATTAGTAAATTCTGTAACAAATATATTGCTCATGGTTAGTTCATTTTAGTTAATACATTAACTAATGTTTAACTAATGAACCTTATTGTAAAGTGTTACCGACATAAGTAACTGCATTTTATTTTTACTTGTTTTCCAGTAAGAATATCTTTAAAACAATATAAATTCTTATTTAACAGTATAAACAAGATACATTCATTTGAGAAACAAAGCTGCACAGGATAGTATAGTCTCGCGTAGCCAGACCTTCAGACTGACAGCAGAAGGTCTGGACTCTATCGCAGCTTTCATTGGCCAAGGACCGCCCAAGGGGACGTTTGACTGACATATAACGCAACCAATCACAGTTCATTTTGTTCGTCATGTTTAGGGGCGTGAAAACGTAAAGTCGATGTTCTTACAATAACAGACCGGCATGTATCTAATAAATTATTAATTTAAGAACGTTGTGCAAGTTTACTGCAACAATAGAGCAGTGAACTTTACATACTTTTGAAAATCCAGCGTTTAGTTGATCATGGAAAACACTCGTTGTCACAGTTGTAAACACGATGGCTTTCTTCTTCCATGAGGGGGTTTTACATCACGGCATTTGTTTCTAGGCGGACTGTTTAAGAACGCAACACGCACGTCTCCCGGACATCCTATAGAATTCAACCAACCAGATGACAACTTTGAAAATCCTGAAGTGTTTCCAGTTAAGTGTTTCATATGCATCAGACGTTCAGCCCACGATTCGTGTGCTGAGACTAAGGATAGTAAGACTTGTTTTCATAGATCTTAAATACTACGTGTCTTACTGCATTGGCAGATTTTTTTTTTTTTTTTTTCCACTTGTTTTGACCTTGTTTATAAAAATTCTACCAGTGTAGTAAGACAAAATACACTAAAAATAAATTCTTCAAAGATACGTTCTTGGAAAACAAGTCTTAATATCTTATGCAGTGCTGCCTCTCAAGTATATTAATTTTATTTCAAGGATTTTTAGATATTTCAAGGTTAAGTTTTTTTTTAAATGCATTGTCACTATGAAAAGCAGTTGTAAAGAGCTAATTCAGTCATACAGGTTTGGAAATGCACAAGAGTGAATAAATAATGACAGCGTTTTCATTTTTGGCGAAATTATTCCAAGAAAGGAGTTTATAAAATGAAATACAGCTGCAGTGGTCGTCAAAGCAAATCATGTGAGTTGTGGCGTCTGGTTCGGGTACAACAGTATGAAAGCTGTCTGATATGGAAAGGTGTGTGCTTTCCAGCGCTTTGGACTGAATTCCTTGCAGACTGCAGACACAGCTCGAGTCGTTCCAGGTAGGTTTCAATTTCAAATGCATTCTCTCTCTCTCCCTCTCTCGAGTGGAGCGCTGATCCCTCGCCCTCACGTTGAGTCTGCGTTACTGGAAACCAGCTGCAGAGAGACTCCCAGAGGTGTGTGTGTGCCAGGATCACCCCTTACCACCAATTAAACCGCACAGTCTTTTCAAAGAATCAATTATTAATAACAAGAGGTACTTCACAGGGGCCTGCCTCTCATGTGCTCTCTCTCTCCCTCATGTCCTTTTTGGGTCCTTTATCCCTCTTTCTTTTACTTCATCACCGTTCCGAATCGTTTATGCATCCTTCCCTCTCTCCACCCTGCCTCCTCGCCGCACGCAGCCTTTTCTCAGGTAACACTGCTGCATTCCAGAAGAGGACAGTGATACGACCGCATTGTGCTAGACACGCAGAGCTGTAGGAAAATCCCCACCCTTGCTTTAATGATGTTGCAAGGGAACAGCGTGCCATCTACTTCGGTAACCTGATCAGCGCAAGCATGCATGTGTGTACTGCGAGCTGGTGTACTGGAGCAGCGTACGGCTCTTATGGTGCAGTGTTCGACTAAACAGCACTATCATGCTCGGCGCAACTCCTAATGGGTCTAGTGGAAAGAGGCCTGGCTCAAGCGGATGTCCGCTGCCTGTACCATAATTGGCACTTAGACAGTAGGAGAGACAGCGAGGGCTGGGTTAGTATGTGCTGGCAATCGCCCGCATATACCGCACGATTGTTATTATGCACGAATAATTGGATTTTTCTTTTTTTGTCATTCTATTCCCTTCACCCCCACGCTTTTCCATCAAGTGTTTAAAGCAGACGAGCCATGCTGACATTACACCGGGACTCAACCCTGATTATTTGTATGAATGATCACATTGTGTCCGGCAAACACAAATATCTCAAGAGATAATTACATTGAGTGGGTGGACAAACAACACGGAATTGAAAACAGAAAGAATACTGTCTGTCCGACATTAGACTTGTTCACAGGTTGAAAAAACACAAGCGGTAAAGGAAAAGGTCACTAAAAAAATTTGTCATTATTTACTCACCTTCAAGTCAGGTCAAACCTGCATGGCTTTCTTTCTTCTGTGGAACACAAAATAACTTTCCTGGCCACTGTTTTCAAAATAAGACTGGAGCTGTGAAGTCTTCTGAACAGATATGACAGTTTTGTGTGACAAACCACAATTTAGAGGGTTAGTTCACCAAAAAATGAAAATTCTGTCATTAAATACTCACACTCATGTCGTTCCACACCCGTAAGACTTACATTCATCAATATCTTTTTGATGAAATCTGAGAGCTTTCTGTCCCTACAGCTACACAACTTACACTTTGATGCTTAAAAAAGTTTATAAGGAGATTGTAAAACTAATCCAAACTAAATTGAGCGATTTAGTCCAATTGTTTTATTTGATGAACAGATTGAATTGAGGCATTTATTCACATATAAACATTCATTAACTCACACATCAGTTGTGGTAAATAGAAGCTCAAGCATGCGTGCTTGATGTATGAGAACCAATGAGGTTCATTATCATGTTACGCAGCACGTTTGAGCTTCCACAAGAACCAATGAGGTTTGTTCTCCTTTGAGCTTCCACAAGAACCAGTGAGGTTCATTCTCGTGTTACGCAGCACATTTGAGCTTCCACAAGAACCAATGAAGTTCATTCTCATGTTACGCAGCACATTTGAGCCTCCACAAGAACCAATGAGGTTCATTCTCATGTTATGCAGCACGTTTGAGCTTCCACAAGAGCCAATGAGGTTTGTTCTCCTTTGAGCTTCCACAAGAACTAATGAGGTTCATTCTCTGTTACGCAGCACATTTAAGCTTCCACAAGAACCAATGGGGTTCGTTCTCCTTTGAGCTTCCACAAGAACCGGTGAGGTTCATTCTCCTGTGTTTCGCAGCACATTTGAGCTTCCGCAAGAGGTTTGTTTTTGTGCGTCAAGCAGGTTTGGTTGAGCTTCCGTTTATGTTCATTGATCAATGTTTATTTGTGAATAAAAGCCTAAATTAAATCTGTTCATCATATAAAGCGATCAAGCCTCTTCAGAAAAAGAAAAAAAAATATCTTTTTTTGGGTGAACTATCCCTTTAAGTCATGATCTCAGTGAATATTCTCCAGTAGGTTGTTGCAACCGATTGACTGAATCAGAGTTGAACTTGCGAACTGTATGAATCATTAAGAATGGCTCTGTGAACTGGATCAACTGATGCATTTAAAGATCTGACTCAAAATAATTATTCAGTCTTGAAATGTACACCGCTACTGCTCACGTAAACATGGCAAGAAGAGCTTGAGCAGACTTTCAGAGAATAACAAATTTACAAATAACACAAAGTTATTGTAAGAATTGGAAAAACACAGATGACTTGAAATATAGTGCAGAAATCATATGGACCACTTTTATGGTGCTTTTTTGCTATATGAAGAAAAAAATAATGATGGTTAATAGGGTTTAAAATAAATTTAAATCATGACAAAATTTTAATTTATGGGTGAACTATACCTTTAAGGCTCTAATCATGCATTATTTACAAAATCTCCTAGACACATAACAGGTCATGTGTGCTGCCATATAAATCAGGTTATCTTGAGTTATGACAACGAATTAGACAAGGACAGGAAGGTGGAGGTAGAGCTAATTATTTGTATTCCACAATCTAATAACTGCGCACATGATATCTTGTAACACGACATCCTGTTTGGCTTTATACTATGCATCCGTTGTACATGTGTTTAACGCGTGGACTCCACTTTGGCTAAGAGATCATCTTAGCTTGCTCACGTCCTACGCCTGGACCACAGCCATGTCCTTGAGTGAGCGCTCTGACACAGCAGCACCCTTGTGGATCTCCTGACAGCTCCCCCGAACAGCGGCCGCACACCCACGCAACATAACATGCGTCAGACCACAGAGCCTCAGGACATGCATGCGTCTATGAGGCTGGACTGTAATGCAGCCTTTTATAAGAACTGAAATCATTTAATGTAATTATAAATATACAAAAATAATGACTTTAAAAACTGCCACTGGTCACCCCTATATGTGTCAGGCTGGTCAGAATGCTCAAACCAATGGGTCAAGGATTGGCTGGTTAGCATGACCCTGTAAGCCCCTGTTGGTAGATGCTGTAACTACACCATCTGGGACAAAAAGCATCTTTCTGCAATAACTGATATTCAAAAGAAGTCATGTATTGCATATACAAGCAACATTTAAATACAGATATGTATACCCACGTTTAAATTATACAGAACGCTCTCATTTGGTACAATACTATAATATTCAAGGTTAAAATTAACACCAGAGCCCAAACCTTAATATTAAATTGCAATTTATTTTCTGCTCTAATAATTACACTCAAGTAAAAACTTAAACATAATGTAGTTTTCATAAACACTTGTATTCATGGCAAATTTATTCAAACATACACATAGAATTAACAGTAAATAAGCTCCTCTCTAGTGTTTCTAGTGTATATGTAAATATATAATGAATTATAAAATATAAAATATGCATATGTATATAAAATATATTTACTGTAACATGCAAATATCGCAATAACCACTTATTATAGAACCAATTATTGCTTTTTTTGTCTTTTCATAGTAAGGTGGGGTTTAAGAAACGAGAATAATAACACACTTTCACATGGTACATGTTTAGTGTATCGAATTTCAGCACAGAAAATGGTTGTATACTGTCTAGCCTACAGCATCTCTCATCCCCTTCAATGAAAGAAAGGAAAAAAAGTTTTAACCTTTCATGGTAATTTGATAAGGCCTTTAAATCATTCCTAGCACAGAGTATGTCTTGATCATCATCTGCACGGCCAGCGACTGTTTTGTTCCCCTCTTCCTGTGTTATCGATCAAATCAGGCTCCAGCGTTTAGTGAACTGATGAAGGACTAGGTATGAAAATTGATTAATGGCTTCTTCAATGTCACTCGTATTCAATGACCATTTGAGGGAATGTAATACTCTGTCCATGGACTGGCTATCTCTCTCCATCTCAATGTCAGCATCGAGCTTAGCTGAGGTTTCTGTAACACCCAGAGAGGGTGACATTGAGACATGGATCTGTGCCTTTTTATCATTTATTTATTTATTTATTTACGTCCGAAAGAGCGTGGAAGCGCAAGGCTGTATGAGGGCCTTAACATATAGATCGCATTTGGAGACCACACACACACTCTCTTTCTTTACTAACATGATGTGACAACATTTGATGATGTGTGATTAATGGAGTGCAGAGCTGATGACTCAATGTGGAGGGAGGCACAAGGACACGCGCCATGTAAGACTCTTTATCATCTGTGTCTCTGTGTGTGTGTGTGTGTGTTCTGGTACAGCAGCTGTAGAGAGGGGCCAAGAACTGCAGTGCACAATTTGATTCTATATCTTTGAAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106285 True 5804 lncRNA 0.39 2 862104 868937

Neighbor

gene id symbol gene type direction distance location
CI01000016_00772375_00772848 NA coding upstream 89215 772270 ~ 772889 (+)
CI01000016_00569502_00581271 NA coding upstream 280605 569502 ~ 581499 (+)
CI01000016_00540871_00541608 PLEKHF2.L, PLEKHF2 coding upstream 320381 540632 ~ 541723 (+)
CI01000016_00496095_00506965 NDUFAF6 coding upstream 355071 496095 ~ 507033 (+)
CI01000016_00318676_00446341 NA coding upstream 415763 318676 ~ 446341 (+)
CI01000016_00885996_00887374 NA coding downstream 17059 885996 ~ 887478 (+)
CI01000016_00952494_00954683 NA coding downstream 83557 952494 ~ 954953 (+)
CI01000016_00959079_00960728 NA coding downstream 89716 958653 ~ 961060 (+)
CI01000016_00972599_01002933 NA coding downstream 103175 972112 ~ 1003172 (+)
CI01000016_01033465_01037665 NA coding downstream 164528 1033465 ~ 1038446 (+)
G93423 NA non-coding upstream 21609 840166 ~ 840495 (+)
G93367 NA non-coding upstream 82933 778775 ~ 779171 (+)
G93364 NA non-coding upstream 87860 773794 ~ 774244 (+)
G93359 NA non-coding upstream 88836 759186 ~ 773268 (+)
G93358 NA non-coding upstream 108265 753601 ~ 753839 (+)
G93409 NA non-coding downstream 58903 927840 ~ 932801 (+)
G93414 NA non-coding downstream 93642 962579 ~ 1040425 (+)
G93413 NA non-coding downstream 209891 1078828 ~ 1079935 (+)
G93434 NA non-coding downstream 215530 1084467 ~ 1084767 (+)
G93442 NA non-coding downstream 326773 1195710 ~ 1198373 (+)
G93406 NA other downstream 36463 905400 ~ 927532 (+)
G95439 NA other downstream 2993238 3862175 ~ 3862305 (+)
G95648 NA other downstream 3403699 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3965621 4829592 ~ 4837457 (+)
G95792 NA other downstream 4350943 5219880 ~ 5225941 (+)

Expression


Co-expression Network