G94098



Basic Information


Item Value
gene id G94098
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 983567 ~ 984870 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU107076
GATCTTCATTTGTGTTCCATAGATGAAGGAAAGTCTTACGGGTTTGGAACGACATGAGGGTGAGTAATTCATGACAGAATTTTCATTTTTTGGTGAACTAACCCTTTAAGCATCCAAATGTTTCTAGGGTCCACTGCATAAATGTCTGTGAATGTGTGAGTTTGTTTGCCTGCAGCATGTGTTCATTCTGAACGCTGCATACAGTACATGCTGTGATCTTACCTGATATGTGGAGACAGGAGAGGCTGCAATGAATGGAGTGATTGATGTTTGAGCGATCATGCGGTTTGTGGAGATGCTGTATGGTGAGGAGTAGAACCTGCAAGATATACAAAAACACTATTAGTACTCTTTTCTGTTTGTCTAACTGTGTGTTCACACTTGTAGGTCGGTTCTCCTGGTTCTTTTGGTCTGGACCAAAAAAGAAAATGATACATTTAGTCTTGGTTCGCTTAACGTCCACACTGCCATTTTTAAGACGAAACGTAAAGATACAAAACAACAAAAAAGAAGCTTTTATGACATATATTTGGCGACTGAACTTACCGAACATCCAAAACAATAATGTGTGCTGGGTGTGCTCATTGTATGTGTGTACATATGATGGTATTTTTAGCAGCTGAGAACTTGTGAAGAGCTTAAACAATGTGTAAAGAGTCAAAACAATGGCAAGAATTCTTCCGTTGCACACAAACGAAGATCTGTTGCAAGGAGACACCGTTTCTGATGCCTGTACCGAACTATAATGGGCAACATTGTGACTAGGATAAGAAAAAGCATGTATCCTTGATCATTCTGTCTTTTTAGGGTTGCATCTTGTGACATCACATCCTGTTTTTGGTTTGTATAGAGTACTTTGGTCTTTGGTGCGTTCATATTTCAGTCAAACCACACCTGAGTTCAATTGGAAGTGGACTGAAACCAACCTTTTCAGGGGTCTTTGGTGCGCACCGGGGCCGCATTCACACTTATTCAAAAGAACCGCTCTAACAGAGCAATCGCACAGGAGTTTGTATTAATCAAACCACACCCTAAGACAAGGGTTTTAAAACTTGGGTTTGGAAAAGAGGGGAAAAAACAGTTAACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU107076 True 1087 lncRNA 0.40 2 983567 984870

Neighbor


gene id symbol gene type direction distance location
CI01000016_00843272_00857193 NA coding downstream 126271 843150 ~ 857296 (-)
CI01000016_00775184_00778097 HINT3 coding downstream 205470 774658 ~ 778097 (-)
CI01000016_00754785_00770356 NA coding downstream 213211 754683 ~ 770356 (-)
CI01000016_00679328_00729780 NA coding downstream 253601 678792 ~ 729966 (-)
CI01000016_00601605_00607255 RSPO3 coding downstream 376312 600622 ~ 607255 (-)
CI01000016_01088942_01089316 NA coding upstream 103682 1088552 ~ 1089339 (-)
CI01000016_01134396_01182271 OSBPL10 coding upstream 148944 1133814 ~ 1182271 (-)
CI01000016_01195747_01197970 KIAA1143 coding upstream 210847 1195717 ~ 1199062 (-)
CI01000016_01199558_01199730 TMEM42 coding upstream 214675 1199545 ~ 1199730 (-)
CI01000016_01202843_01213613 ZDHHC3B, ZDHHC3, ZDHHC3A, MGC82349 coding upstream 216388 1201258 ~ 1213613 (-)
G94213 NA non-coding downstream 5408 976880 ~ 978159 (-)
G94137 NA non-coding downstream 120605 858768 ~ 862962 (-)
G94106 NA non-coding downstream 185848 797484 ~ 797719 (-)
G94073 NA non-coding downstream 237592 745672 ~ 745975 (-)
G94084 NA non-coding upstream 15554 1000424 ~ 1009153 (-)
G94247 NA non-coding upstream 58708 1043578 ~ 1043797 (-)
G94238 NA non-coding upstream 71485 1056355 ~ 1057041 (-)
G94253 NA non-coding upstream 74418 1059288 ~ 1060054 (-)
G94256 NA non-coding upstream 140172 1125042 ~ 1131942 (-)
G94786 NA other upstream 1285966 2270836 ~ 2276275 (-)
G95070 NA other upstream 2000390 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 2650737 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 2880891 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 3927838 4918975 ~ 4922518 (-)

Expression



Co-expression Network