G93413


Basic Information

Item Value
gene id G93413
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1078828 ~ 1079935 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106288
AATGTAATTCTCTACTGTCACCTTTGAGCACCCTTGATGAATAAAATTATTCATTTCTGTCCAAAAAAAAAAAAAATGCAGATGGATCGTCTCTGCAATACTGTCTTTGTTGACAGTCTTTGAAACTCCCTTTTAAAGAGTTGATTCACATGGCTGATTAGATTCATTCACTCTTAGTGATTCCCCCCTGCTATCTGCTTCTTTTATAAACTTATAAAGCTTCAAGTTTTGCTTGAGTGCCACATTCATCATCACCATAACAAGGCTGGCACATTAAATGTTGTACCAAAGGCCATGAAGGTCTTTATGGGTCCTCTCCAGTTCTTTCAGCAGTTAAGTTGAAGTGGCGGGCTTTAAGCCATGTGCCGGCTGACTGATAAGTATCTGTTTGAAGACATTCACCTTTTTTCCTGCACATCTGGTAGTGAGCCACCATCAAGCTGTGTTTCATCATGCTCTTTGATCGCTGGCGCCACCCGAGGGTACAGAGATCAAACAACAGATAAGAGATAGACACTGCTAGGGGAACAGTGCACACAGCCCTAAGACACAACAGACTATCATACTTGCTTCCAAACAAACACACGTGGAAGGAGCTGGGATAATGACAGGATGGCCAACTGGAGTATTAGTGCGCCTCCGTTATATTTTTGATGACCTTTGGGCCATAAAAGTACAAATTAATCCAAGAAGCAGACTGTCAAATGGTCTATTTTTAGGACTATGAAGACTGTTTTATCATTTTCAATTAAAAACATTTAACAGTCTGTTGTAAAAAAAAAAAAAAAAAAAAAAAAATGATGGAGGCCGCTGTGCTCATTGGGACCTTCAATGATGCAGACATTTTTCTGTACCCTTCCCCAGATCTGTGCCTCGATACAATCCTGTCTCAGAGGTCTGCAGACAATTCCTTGGTCTTCATGGCTTGGTTTGTGCTCTGACATGCACTGTTAACTGTGGGACCTTATATAGACAGGTGTGTGCCTTTCCAAATCATGTCCAATCAACTGAATTTACCACAGGTGGACTCCAATCAAGTTGTAGAAACATCTCAAGGACGATCAGTGGAAACAGGATGTACCTGAGCGCAATTTTGAGCGTCATGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106288 True 1108 lncRNA 0.41 1 1078828 1079935

Neighbor

gene id symbol gene type direction distance location
CI01000016_01052539_01073915 NA coding upstream 3295 1052539 ~ 1075533 (+)
CI01000016_01033465_01037665 NA coding upstream 40382 1033465 ~ 1038446 (+)
CI01000016_00972599_01002933 NA coding upstream 75656 972112 ~ 1003172 (+)
CI01000016_00959079_00960728 NA coding upstream 117768 958653 ~ 961060 (+)
CI01000016_00952494_00954683 NA coding upstream 123875 952494 ~ 954953 (+)
CI01000016_01122656_01129008 STT3B coding downstream 42721 1122656 ~ 1129008 (+)
CI01000016_01183747_01191853 GPD1L coding downstream 103812 1183747 ~ 1192858 (+)
CI01000016_01217119_01220858 EBAG9 coding downstream 137184 1217119 ~ 1221937 (+)
CI01000016_01238151_01242924 GDF6, GDF6A coding downstream 158056 1237991 ~ 1242960 (+)
CI01000016_01253760_01273553 NA coding downstream 173471 1253406 ~ 1273953 (+)
G93414 NA non-coding upstream 38403 962579 ~ 1040425 (+)
G93409 NA non-coding upstream 146027 927840 ~ 932801 (+)
G93410 NA non-coding upstream 209891 862104 ~ 868937 (+)
G93423 NA non-coding upstream 238333 840166 ~ 840495 (+)
G93367 NA non-coding upstream 299657 778775 ~ 779171 (+)
G93434 NA non-coding downstream 4532 1084467 ~ 1084767 (+)
G93442 NA non-coding downstream 115775 1195710 ~ 1198373 (+)
G93476 NA non-coding downstream 132409 1212344 ~ 1212621 (+)
G93449 NA non-coding downstream 148263 1228198 ~ 1235846 (+)
G93497 NA non-coding downstream 181985 1261920 ~ 1262207 (+)
G93406 NA other upstream 151296 905400 ~ 927532 (+)
G95439 NA other downstream 2782240 3862175 ~ 3862305 (+)
G95648 NA other downstream 3192701 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3754623 4829592 ~ 4837457 (+)
G95792 NA other downstream 4139945 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 4325934 5405791 ~ 5407963 (+)

Expression


Co-expression Network