Gene
RNA
| Item | Value |
|---|---|
| gene id | G93483 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000016 |
| NCBI id | null |
| chromosome length | 12175457 |
| location | 1340452 ~ 1342798 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU106367 | False | 1188 | lncRNA | 0.40 | 6 | 1340452 | 1342798 |
| TU106368 | True | 962 | lncRNA | 0.38 | 2 | 1340452 | 1341657 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000016_01277792_01304615 | NA | coding | upstream | 35690 | 1276928 ~ 1304762 (+) |
| CI01000016_01253760_01273553 | NA | coding | upstream | 66499 | 1253406 ~ 1273953 (+) |
| CI01000016_01238151_01242924 | GDF6, GDF6A | coding | upstream | 97492 | 1237991 ~ 1242960 (+) |
| CI01000016_01217119_01220858 | EBAG9 | coding | upstream | 118515 | 1217119 ~ 1221937 (+) |
| CI01000016_01183747_01191853 | GPD1L | coding | upstream | 147594 | 1183747 ~ 1192858 (+) |
| CI01000016_01408124_01408966 | TMEM74 | coding | downstream | 63838 | 1406636 ~ 1409165 (+) |
| CI01000016_01476236_01476607 | NA | coding | downstream | 133438 | 1476236 ~ 1476762 (+) |
| CI01000016_01509959_01560806 | EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA | coding | downstream | 167161 | 1509959 ~ 1561122 (+) |
| CI01000016_01563821_01567070 | NA | coding | downstream | 219600 | 1562398 ~ 1567529 (+) |
| CI01000016_01588035_01601276 | RSPO2 | coding | downstream | 244272 | 1587070 ~ 1601909 (+) |
| G93497 | NA | non-coding | upstream | 78245 | 1261920 ~ 1262207 (+) |
| G93449 | NA | non-coding | upstream | 104606 | 1228198 ~ 1235846 (+) |
| G93476 | NA | non-coding | upstream | 127831 | 1212344 ~ 1212621 (+) |
| G93442 | NA | non-coding | upstream | 142079 | 1195710 ~ 1198373 (+) |
| G93434 | NA | non-coding | upstream | 255685 | 1084467 ~ 1084767 (+) |
| G93547 | NA | non-coding | downstream | 51900 | 1394698 ~ 1449594 (+) |
| G93598 | NA | non-coding | downstream | 78822 | 1421620 ~ 1449437 (+) |
| G93567 | NA | non-coding | downstream | 118802 | 1461600 ~ 1461978 (+) |
| G93565 | NA | non-coding | downstream | 119319 | 1462117 ~ 1469355 (+) |
| G93624 | NA | non-coding | downstream | 153595 | 1496393 ~ 1554026 (+) |
| G93406 | NA | other | upstream | 412920 | 905400 ~ 927532 (+) |
| G95439 | NA | other | downstream | 2519377 | 3862175 ~ 3862305 (+) |
| G95648 | NA | other | downstream | 2929838 | 4272636 ~ 4273905 (+) |
| CI01000016_04829592_04837305 | NA | other | downstream | 3491760 | 4829592 ~ 4837457 (+) |
| G95792 | NA | other | downstream | 3877082 | 5219880 ~ 5225941 (+) |
| CI01000016_05405791_05407797 | AICDA | other | downstream | 4063071 | 5405791 ~ 5407963 (+) |
