G93779


Basic Information

Item Value
gene id G93779
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2104906 ~ 2105133 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106695
TTTGACTGTAGTAAATTAATGTAAAAACCGACACTTCAAATCAACATTTCAAACAAAAAAAAAAAATCTAAACCTTGACAAAAAGTAGTCTTTGAGAATGTCTAAGTATAAATCCAAATCCAAAACTTAATAAAAATAAGTGTTTGTGTCCAAAAACCACTAGAGAATTTATAAGCCACTTTATATAGAGCTCTATAGGAATCTAGTGGTTACAATATGGCATTGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106695 True 228 lncRNA 0.28 1 2104906 2105133

Neighbor

gene id symbol gene type direction distance location
CI01000016_02000795_02079453 ADGRB1, ADGRB1A coding upstream 24010 2000209 ~ 2080896 (+)
CI01000016_01989129_01990437 NA coding upstream 113911 1989024 ~ 1990995 (+)
CI01000016_01656995_01657299 NA coding upstream 446516 1656995 ~ 1658390 (+)
CI01000016_01588035_01601276 RSPO2 coding upstream 502997 1587070 ~ 1601909 (+)
CI01000016_01563821_01567070 NA coding upstream 537377 1562398 ~ 1567529 (+)
CI01000016_02220464_02221013 NA coding downstream 115331 2220464 ~ 2221030 (+)
CI01000016_02235073_02261683 CEP162 coding downstream 129940 2235073 ~ 2262308 (+)
CI01000016_02337039_02343109 POGZB coding downstream 231906 2337039 ~ 2343109 (+)
CI01000016_02355737_02362570 SELENBP1, SBP1 coding downstream 250604 2355737 ~ 2363246 (+)
CI01000016_02367430_02368661 PI4KB coding downstream 262297 2367430 ~ 2368687 (+)
G93794 NA non-coding upstream 10724 2093952 ~ 2094182 (+)
G93777 NA non-coding upstream 59623 2039589 ~ 2045283 (+)
G93780 NA non-coding upstream 126474 1968538 ~ 1978432 (+)
G93711 NA non-coding upstream 162589 1913797 ~ 1942317 (+)
G93624 NA non-coding upstream 550880 1496393 ~ 1554026 (+)
G94696 NA non-coding downstream 93875 2199008 ~ 2271134 (+)
G94726 NA non-coding downstream 225393 2330526 ~ 2333592 (+)
G94729 NA non-coding downstream 252355 2357488 ~ 2358108 (+)
G94848 NA non-coding downstream 397994 2503127 ~ 2503442 (+)
G93406 NA other upstream 1177374 905400 ~ 927532 (+)
G95439 NA other downstream 1757042 3862175 ~ 3862305 (+)
G95648 NA other downstream 2167503 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 2729425 4829592 ~ 4837457 (+)
G95792 NA other downstream 3114747 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3300736 5405791 ~ 5407963 (+)

Expression


Co-expression Network