G94696


Basic Information

Item Value
gene id G94696
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 2199008 ~ 2271134 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU107724
TGCCCCAGAGTGTGAGAATAAAGGTTACATTTGTTAGAAAAATGTAGATAATGAATAGACATCTAAAATAGTATACAATCTGTGATCATTTCAATTCAGATATAAAAGTTTCAACAACACACAAATTTTTAGTAGGCCTATATGGATTTTTTTTTTTTTTTTTTTTCAAAGCTCCAGACTTTAATTCAGTGAAAATGTCGGTATTGATACCACAGTGTGCAGACAGTGAAAGGATGTTCCAGTCCTTCCTCTTAGATGACATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107724 True 263 lncRNA 0.32 2 2199008 2271134

Neighbor

gene id symbol gene type direction distance location
CI01000016_02000795_02079453 ADGRB1, ADGRB1A coding upstream 118112 2000209 ~ 2080896 (+)
CI01000016_01989129_01990437 NA coding upstream 208013 1989024 ~ 1990995 (+)
CI01000016_01656995_01657299 NA coding upstream 540618 1656995 ~ 1658390 (+)
CI01000016_01588035_01601276 RSPO2 coding upstream 597099 1587070 ~ 1601909 (+)
CI01000016_01563821_01567070 NA coding upstream 631479 1562398 ~ 1567529 (+)
CI01000016_02337039_02343109 POGZB coding downstream 65905 2337039 ~ 2343109 (+)
CI01000016_02355737_02362570 SELENBP1, SBP1 coding downstream 84603 2355737 ~ 2363246 (+)
CI01000016_02367430_02368661 PI4KB coding downstream 96296 2367430 ~ 2368687 (+)
CI01000016_02374077_02383616 PI4KB coding downstream 102809 2373943 ~ 2384488 (+)
CI01000016_02385791_02400026 MYO1EB coding downstream 114657 2385791 ~ 2400452 (+)
G93779 NA non-coding upstream 93875 2104906 ~ 2105133 (+)
G93794 NA non-coding upstream 104826 2093952 ~ 2094182 (+)
G93777 NA non-coding upstream 153725 2039589 ~ 2045283 (+)
G93780 NA non-coding upstream 220576 1968538 ~ 1978432 (+)
G93711 NA non-coding upstream 256691 1913797 ~ 1942317 (+)
G94726 NA non-coding downstream 59392 2330526 ~ 2333592 (+)
G94729 NA non-coding downstream 86354 2357488 ~ 2358108 (+)
G94848 NA non-coding downstream 231993 2503127 ~ 2503442 (+)
G94850 NA non-coding downstream 237509 2508643 ~ 2508891 (+)
G94874 NA non-coding downstream 273617 2544751 ~ 2545005 (+)
G93406 NA other upstream 1271476 905400 ~ 927532 (+)
G95439 NA other downstream 1591041 3862175 ~ 3862305 (+)
G95648 NA other downstream 2001502 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 2563424 4829592 ~ 4837457 (+)
G95792 NA other downstream 2948746 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3134735 5405791 ~ 5407963 (+)

Expression


Co-expression Network