G99225


Basic Information

Item Value
gene id G99225
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 9917896 ~ 9918176 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU112898
CAGTGTTAATTTCATTGACGAATAATTTTCGTCATAATTTTCGTCAACAACATTTTTTCACGGACGAAAACGAGACGATGACTAAATAAAAATGCGTTTTGAATGACTAAAACTATGACTAAAATCTACTCTAATTTTCGTCAACGAATAAAAACGAGACGAAAATGAAAGAGAGGGACGATTTGGGAAGATATCCAGTTAGGACTGCTGTCCTGTGTGGAAGATGCGCACATTTGAAGTGTAATGTGCTGATCTAACCGCGGGAAACGCGGCGCTGTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU112898 True 281 lncRNA 0.39 1 9917896 9918176

Neighbor

gene id symbol gene type direction distance location
CI01000016_09739013_09746676 NA coding downstream 171220 9739013 ~ 9746676 (-)
CI01000016_09654611_09661197 NA coding downstream 256699 9653502 ~ 9661197 (-)
CI01000016_09638800_09651752 CEP76 coding downstream 266144 9638592 ~ 9651752 (-)
CI01000016_09510177_09512196 ID4 coding downstream 405531 9509622 ~ 9512428 (-)
CI01000016_09475913_09487996 NA coding downstream 429604 9474997 ~ 9488292 (-)
CI01000016_09959197_09962175 NA coding upstream 39746 9957922 ~ 9963244 (-)
CI01000016_10025722_10027148 NA coding upstream 107326 10025502 ~ 10027259 (-)
CI01000016_10089136_10135299 NA coding upstream 170540 10088716 ~ 10135299 (-)
CI01000016_10228314_10299064 ULK4 coding upstream 310138 10228314 ~ 10299064 (-)
CI01000016_10386099_10386648 NA coding upstream 467649 10385825 ~ 10387482 (-)
G99217 NA non-coding downstream 29746 9887657 ~ 9888150 (-)
G99216 NA non-coding downstream 30309 9887373 ~ 9887587 (-)
G99204 NA non-coding downstream 62067 9855622 ~ 9855829 (-)
G99201 NA non-coding downstream 65459 9852206 ~ 9852437 (-)
G99189 NA non-coding downstream 81900 9825890 ~ 9835996 (-)
G100209 NA non-coding upstream 85580 10003756 ~ 10003959 (-)
G100213 NA non-coding upstream 97977 10016153 ~ 10016831 (-)
G100214 NA non-coding upstream 98780 10016956 ~ 10017211 (-)
G100215 NA non-coding upstream 99620 10017796 ~ 10018869 (-)
G99178 NA other downstream 102941 9814361 ~ 9814955 (-)
G98691 NA other downstream 660285 9256102 ~ 9257611 (-)
G98679 NA other downstream 677967 9234996 ~ 9239929 (-)
CI01000016_08926089_08945071 NA other downstream 972667 8925960 ~ 8945229 (-)
G100190 NA other upstream 132992 10051168 ~ 10052389 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
mexican tetra (Astyanax mexicanus) G330265 NA non-coding NW_019172913.1 APWO02000139.1 2305956 ~ 2306407 (+)