G99442


Basic Information

Item Value
gene id G99442
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10276703 ~ 10277009 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113154
AAAATAACAAACACATTATGTAATATAATTTTATTTCAAGCGAATGAGGAAAATAAAGTGGGTTTAATCCAAGCATCTTTAAAAGTTTTTAGAATTATAGAATAATCTGGCATCTTTCTGAAGGCACTCTGGCTGCGCTTGAGATGTTGAATGCTCTGTTGATCATAAAACATGTTAATTACACAAATAAAATGTTTAGCGTACATTTATTGAACAGTGATTGATTAGCCTATATGTAGTTATTTACTGTAAACTTTATTATTAAGCGAAGAAAACATTTTGTTGAAATATCCACAAGATATAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113154 True 307 lncRNA 0.28 1 10276703 10277009

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 224336 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 275982 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 321375 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 373821 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 390470 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 56868 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 58249 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 143566 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 231455 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 310190 10587199 ~ 10588775 (+)
G99436 NA non-coding upstream 5574 10270756 ~ 10271129 (+)
G99434 NA non-coding upstream 7318 10269173 ~ 10269385 (+)
G99433 NA non-coding upstream 7814 10268614 ~ 10268889 (+)
G99429 NA non-coding upstream 11001 10265500 ~ 10265702 (+)
G99424 NA non-coding upstream 17137 10259345 ~ 10259566 (+)
G99449 NA non-coding downstream 5354 10282363 ~ 10282607 (+)
G99451 NA non-coding downstream 9557 10286566 ~ 10286821 (+)
G99453 NA non-coding downstream 14058 10291067 ~ 10291292 (+)
G99454 NA non-coding downstream 15291 10292300 ~ 10292509 (+)
G99455 NA non-coding downstream 22350 10299359 ~ 10299612 (+)
G99410 NA other upstream 39852 10234400 ~ 10236851 (+)
G99041 NA other upstream 351049 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 479763 9795950 ~ 9842576 (+)
G98288 NA other upstream 1273986 8996098 ~ 9002717 (+)
G97824 NA other upstream 2260928 8014363 ~ 8015775 (+)
G99456 NA other downstream 17382 10294391 ~ 10298904 (+)
G99940 NA other downstream 1394636 11671645 ~ 11672873 (+)
G100178 NA other downstream 1883632 12160641 ~ 12162845 (+)

Expression


Co-expression Network