G99498


Basic Information

Item Value
gene id G99498
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10604968 ~ 10606304 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113213
AATGTCTTAAAAAATTATGGATGATTGATCATACGAAATACAATCTGTGATGACACCTGAAATTCACACAATGAAAGGAAATACCAAAAGGCCTTTATGGTCACATGACCTGGGTCAAGAGGGTTTATATATTAAGAGAAAAACGTGTGGGAAAGAATGTAATTTATTGTGGAGCAGAAGACCTAATCTGATCCAAACCTATGGTTCAAAGAGCGTCCGGGGGTTTAATACATACAGCAAAAACATAACAGCTTTAAACAAATGCATTTACAACAAAAGCAAAATCATTAAATATATCACTTTTTCAGGCTTTCTAGACACACATTTAACTTTACCCTGAACAACAAATGCACTGAATAATTTGGAGTCCTTGCACTAAAATCTTTGTGTGGCACTATACCTCTTGTGTGAAAAAAAATGACTCGTGTTTTGTTAGCAATGTACTTGTTGTACAGCCAATTATTTTTAAGCATTATTTTTAAGCAGTACCATTTCTTCCCCAAGTATATTGCCAAACACTGGTTTAAAAAAAAAAAAAAACCATTTTGTATATTGAGGATTTTTATTCTCCATCAAGAAGAATGAAAATCCTCAATATACAAAATGTATTTTTATTTTTTTTTTGATACTGTGCACGGTTAAGGGTCTATCCCCCATTCCATATTAACAAATGTCCTCTAAGATATTATCATGATTCCAAGACTGAGCTGTCAATCACAGAAAGCAAACCAATCAAGGGTCAGATACAGAATGGAGGGGAAGAATAAGCAGCTGCAAAATGACAGGCTAAAATCCAGTAAATGAGATTATGCAGTGCTAAGGAAGACTAAGCTGTCAGGGGTCGGTTATGGAGTGGGCCCTTCATGGGCAGCATGCTCCCAGAACAGAGATTACGGCCTCAGGCTGAGGCCATTGTTAAAACTCTGCATGCGCTTTCAAACCTATGAACGTTTAGAGGCTTCCCATTTAACACCATCTAGTAACAGGATTAGAGGCACACTAGAACAAGCAGCCAATCAAGCGCATGAAAACACAGGTCAGGCTCTTTTAGCTGATGCTATGGTGCTGAGCCTGATGAAGCTTTAGGAGATGTTTAGATAATTGCTGTGTAAATTCATGGGCTATGTTCGGAATGGAATATTAGCTTACTATTTACCAAATATACTACTAGGGGGTGGACAATACGGCAAAAATATCATATCACTCACCCTCATGTCATTCCAAACCTGTGACTACAGTGGTTCAACCTTAATGTTATGAAGCGATGAGAATCCTTTTTGTACTTTGAAGTACTTTTGTGCTGTTTCTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113213 True 1312 lncRNA 0.37 2 10604968 10606304

Neighbor

gene id symbol gene type direction distance location
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding upstream 16193 10587199 ~ 10588775 (+)
CI01000016_10508464_10510408 NA coding upstream 94136 10508464 ~ 10510832 (+)
CI01000016_10421936_10422623 NA coding upstream 180452 10420575 ~ 10424516 (+)
CI01000016_10339126_10370881 TRAK1 coding upstream 232317 10335258 ~ 10372651 (+)
CI01000016_10333877_10334229 NA coding upstream 270622 10333877 ~ 10334346 (+)
CI01000016_10676271_10682495 NA coding downstream 69783 10676087 ~ 10682839 (+)
CI01000016_10748252_10749230 NA coding downstream 141948 10748252 ~ 10749343 (+)
CI01000016_10756608_10758149 NA coding downstream 148089 10754393 ~ 10758201 (+)
CI01000016_10760640_10783664 ANO10A, ANO10 coding downstream 154336 10760640 ~ 10783859 (+)
CI01000016_10865834_10867561 POMGNT2 coding downstream 259045 10865349 ~ 10867648 (+)
G99379 NA non-coding upstream 10704 10594035 ~ 10594264 (+)
G99365 NA non-coding upstream 32412 10570702 ~ 10572556 (+)
G99362 NA non-coding upstream 82402 10516474 ~ 10522566 (+)
G99484 NA non-coding upstream 130225 10473981 ~ 10474743 (+)
G99461 NA non-coding upstream 218317 10385838 ~ 10386651 (+)
G99364 NA non-coding downstream 23159 10629463 ~ 10632125 (+)
G99554 NA non-coding downstream 129892 10736196 ~ 10736496 (+)
G99552 NA non-coding downstream 130283 10736587 ~ 10736879 (+)
G99557 NA non-coding downstream 225966 10832270 ~ 10836628 (+)
G99607 NA non-coding downstream 244753 10851057 ~ 10851280 (+)
G99456 NA other upstream 306064 10294391 ~ 10298904 (+)
G99410 NA other upstream 368117 10234400 ~ 10236851 (+)
G99041 NA other upstream 679314 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 808028 9795950 ~ 9842576 (+)
G98288 NA other upstream 1602251 8996098 ~ 9002717 (+)
G99940 NA other downstream 1065341 11671645 ~ 11672873 (+)
G100178 NA other downstream 1554337 12160641 ~ 12162845 (+)

Expression


Co-expression Network