CI01000018_02910647_02918787


Basic Information

Item Value
gene id CI01000018_02910647_02918787
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2910431 ~ 2918787 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_02910647_02918787.mRNA
TGGAGCTCTTCTGTACGACTCGATGATAAAACAGTCATAATCACAGGAGCTAATACAGGCATAGGCAAAGAGACAGCGAGAGACCTTTCTAGAAGAGGGGCTCGAGTCATCATGGCCTGTCGAGACCTGGCAAAAGCAGAGGCAGCCAGAGAAGAATTAATGCAGGATTCTGGAAACCAAAACATTGTGGTGAAAAAACTTGATTTATCAGATACCAAATCCATCAGAGCATTTGCTGAGCTCATTAACAAGGAGGAAAAGCAAGTTAACATCCTGATCAACAATGCTGGAATCATGATGTGCCCGTATTCAAAAACTGCAGATGGCTTTGAGATGCAGTTTGGTGTAAACCATTTAGGTCATTTTCTGCTCACCTACCTTCTGTTGGACCTTCTCAAGAAATCAACCCCCTCCAGGATCGTCAATGTGGCTTCTGTGGCCCATACGTGGGGCAGCATCCATCTGGATGACATAAACAGTGAGAAGGGTTACTCTCCACGGAGGGCCTATGGCCAGAGCAAACTAGCTAACATCCTCTGCACACGCTCCTTGGCTAAAAGACTGCAGGGCAGTGGTGTGACTGTGTACTCCCTTCATCCTGGTGTGGTGCAGTCAGAGCTGTTTAGGAACCTCAGCAAGCCTGTGCAGATCGCAGTCAAGGTCTTCAGCCCCTTCACCAAGACCACCATTCAGGGGGCCCAGACCACCATCTACTGCGCTGTGGAGCCGGAGCTGGACAAAGAGAGTGGAGGATATTACAGTGACTGTGCCCCAGCTCAGTGTTCAAGAGAAGCTTCAGATGATGAAATGGCTCAGAAACTTTGGGAACTCAGCTGTCAGATGCTCAGCATTACATGGGACTGATGGAGCGCTCCTCGCAGTGACGCTCTTATGCGAGCGGAATGAAAGCTTTTGTACTAATGTCATAGATAATGGAAACTGTAGTATTCATACAACGCATGACTGAATCAGCACTGTTTTATATTGTACATTGTATACTCTTTTTTTAATGCCCTTGGCTGTGCTGTTATAATTTCAATAGACATGTTATGAATTTAAAATGTATTTTGGTCTATTAAA

Function

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_02910647_02918787.mRNA True 1080 mRNA 0.46 6 2910431 2918787

Neighbor

gene id symbol gene type direction distance location
CI01000018_02906370_02908615 NA coding downstream 1816 2906225 ~ 2908615 (-)
CI01000018_02613387_02620287 CNTNAP2 coding downstream 290144 2613024 ~ 2620287 (-)
CI01000018_02537614_02606018 NA coding downstream 304270 2537510 ~ 2606161 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A coding downstream 422413 2389201 ~ 2488018 (-)
CI01000018_02381118_02382741 NA coding downstream 527682 2380898 ~ 2382749 (-)
CI01000018_02922931_02928062 NA coding upstream 3545 2922332 ~ 2928062 (-)
CI01000018_02931983_02940190 NA coding upstream 13139 2931926 ~ 2940420 (-)
CI01000018_02950311_03005969 KIAA1468 coding upstream 31060 2949847 ~ 3006204 (-)
CI01000018_03035039_03102978 ARFGEF1 coding upstream 115862 3034649 ~ 3103604 (-)
CI01000018_03108551_03121242 CPA6 coding upstream 188303 3107090 ~ 3121242 (-)
G104069 NA non-coding downstream 1066 2908925 ~ 2909365 (-)
G104036 NA non-coding downstream 94778 2815427 ~ 2815653 (-)
G104025 NA non-coding downstream 124536 2785665 ~ 2785895 (-)
G103996 NA non-coding downstream 396178 2513698 ~ 2514253 (-)
G104073 NA non-coding upstream 26759 2945546 ~ 2945745 (-)
G104084 NA non-coding upstream 186511 3105298 ~ 3105576 (-)
G104099 NA non-coding upstream 256537 3175324 ~ 3202607 (-)
G104115 NA non-coding upstream 287593 3206380 ~ 3207820 (-)
G104121 NA non-coding upstream 300349 3219136 ~ 3264709 (-)
G103842 NA other downstream 950373 1959497 ~ 1960058 (-)
G104968 NA other upstream 563317 3482104 ~ 3500514 (-)
G105104 NA other upstream 1088910 4007697 ~ 4017817 (-)
G105200 NA other upstream 1324680 4243467 ~ 4246010 (-)
CI01000018_04856240_04875704 DAP other upstream 1936294 4855081 ~ 4876532 (-)
CI01000018_06021105_06025859 NA other upstream 2972549 6020861 ~ 6025876 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location