CI01000018_04759598_04770734 (TMPRSS7)


Basic Information

Item Value
gene id CI01000018_04759598_04770734
gene name TMPRSS7
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4759509 ~ 4770734 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_04759598_04770734.mRNA
GTAGCTGATGTGTCCGTGGAAGTGGCTACGGTGGACGCAACTCTTAATAAACTATGCAGAAGATACAACAGACGCAGAAGAAGAGCGAAAAAGCCAAAAAAGACGATCACAATATTGAATCTACAGAATCTGGCCATCCTCATCACAGTGGTGGTGTTTGTCATTGTGGTGATAATGTGGTCTCTTCTGTGGGTTTTTATATTCCGGAGAGAGAGCAACAGTGGTGTTTATTTTGCTGGTATGTTCCGTGTTGCCAACGTGGAGTTTATACCAGAGTACCGGCACGCTGACTCGAGTGAGTTTGTATCCATGGCTACCCGCGTACAGCATGTGATAACCAGCGTATACCGAACGTCATCAGTGTCCAGACTCTACAAGCAAACCGTCATCTCTGATCTGAGTAATAATAATCAAGGTGGTGTACTGGTGCATTTCTGGATGATCTTCGTGGTGCCGCACCTGAAGACTCCATCAGTGTGTGAGGAGTGTGTGAGTGCCATCCTCAGAGACTCTGTGCTTATGAGTATGAAGAACAGGTCTTCAGTGGGCTTCCTGCAGGGCCTTCCTGTGGACATCGACTCCATTCTTGTCAATGTTGCTTTACGCTCAGATTACACATCAACAGCTGTGGGCTCTCAGTGTGTGGATAAGCTGTACGCAGGTGTTCCTGATGTGAGTGTTCCTCTCAACGTGTTCTCTTCATGGGGAAGCTTGAGCTGCTACATCAAACTGACAAGTGCTCCAGGCTCTGTCATCCGACTCACTGTGAAGAGCTTTCGCATTGACCCTAGTGACTGCATCTATGATTCCCTCACCGTGTATGACTCTCTGCTTCCCATGAGAGGCATGATTCTCAACAGGTTTTGTGAGTCAGTGTCAACCCCGATCTCATTGGTCTCCACCTCCAATGTCATGCTGCTCTCATTTAGACTCACACAAGGCAGAAAGATCTTCCAAGGATTCTTCCAGGCTCTCATGGAGGAGCAATGTATGAATATTATAGCGTTACCTGCTGGCGCAGGTGATGCTGGAGTGATAACCAGTCCATTCTACCCCAGTCTGTTGCCCCGTCAGTGCTCCTGCACCTGGATGTTTCAGATGGCCAGCGGTCCTCTGGGTGTAGCTCTCAGGTTCCAGAACTACACGCTAAAACTAAAAGACTCGCAATACTGTGAACACGGCTGGTGGAAAGTCAATGAGATTATATATTGTGGAAATTACATTGACCACTCAACCGTCTTCCGTATTCCTGCGCAAAACCCTGAAGTGGTTTTCCGCTGCAGCTCACGAAATGCTGACCAACCCTTCAGTGCCACTTACAGCAGCTACAACACCAGTCAGCAAGTATCAGAGGTACATATCAGCTTAGATAGGAGGGTCTTAAATGCAAGAGAGAAAGCTAAACCTCCTAAAATCTGTGGAGGTTCATTTCCTTTACACCCATTATACATCTGTAATGGAGAGATGGACTGTTCCAGTGGTAAAGATGAGACCAACTGTACTCAGGAAACTAGCTGTTCTGGAGTCAGTTACCACTGTGGCAATGGAGCCTGCATTCTTAAGAAAAATGCGAAATGTGATGGCTTACCCGACTGCTTCGACCGCAGTGACGAGGAGGACTGTGCCTGTGGCAATCCCACCCCTTTAAAGCGCGTATTTGATAGCGCCTCCCCACAACAACGTATTGTGGGTGGGATCAATGCTGTGGAGGGAGAGTGGCCGTGGCAGGTCAGCATGCATTTTTCTGGTCAGCTGTATTGTGGAGCATCGGTCCTCTCTGATGAGTGGCTCATTTCTGCAGCGCACTGTTTCAGCAAAGAGAGGTTGGCAGATCCACGTATGTGGATGGCTCATCTGGGCATGCTAAACCAGGGAAGTGCCAAGCATGTGGCCGAGATCCGTCGAATTGTGGTGCATGAATACTACAATGCAAGAAATTTTGACTATGACATTGCCCTGGTGCAGTTGAAGAAGGCCTGGCCCAGCAGCCTGGAACAATATATCCAGCCCATCTGCCTGCCAGCCCCTTCTCAGACCTTCACTGAGGGGTACCGCTGCTGGGTCACCGGTTGGGGTTACCGTTCTGAACAGGATAAGGTGCTACCCACAGTATTGCAAAAGGCAGAAGTTAGCATTCTAAGCCAGAGTGAATGCAAGAGAAGCTACGGCCCCGTGTCACCCCGCATGCTGTGTGCTGGCGTGCCCTCAGGAGAACAAGATGCCTGCCGGGGAGATTCGGGTGGCCCCCTGTCCTGTCAAGCACGCACAGGCAGCCGCTGGTTTCTGACGGGCATTGTGAGTTGGGGTTCCGGCTGTGGCAGACCCAACCTTCCTGGAGTTTACACCAGAGTGGCCAAGTTCATAGATTGGATCCAAAGACATATTCAAAATGAACTCTTATGAAATGCACAGCCAAGTAAATCCACCTTATAATTCAGTCTAAAACTGAACTCACTCAAAACAAGCCATTTTTCACCTAAACAACAAATAAA

Function

symbol description
tmprss7 Orthologous to human TMPRSS7 (transmembrane serine protease 7).

GO: NA

KEGG:

id description
K09638 TMPRSS7; transmembrane protease serine 7

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_04759598_04770734.mRNA True 2492 mRNA 0.49 17 4759509 4770734

Neighbor

gene id symbol gene type direction distance location
CI01000018_04738374_04757471 NA coding downstream 2038 4738280 ~ 4757471 (-)
CI01000018_04657706_04674073 NA coding downstream 85436 4657571 ~ 4674073 (-)
CI01000018_04627321_04645724 LNX2A, LNX2 coding downstream 113327 4627169 ~ 4646182 (-)
CI01000018_04604468_04611851 USP12.S, USP46, USP12, USP12.L, RGD1561481, USP12A, USP12-LIKE coding downstream 147658 4603787 ~ 4611851 (-)
CI01000018_04595424_04596449 GPR12 coding downstream 161922 4594465 ~ 4597587 (-)
CI01000018_04773554_04792048 SPATA13 coding upstream 2492 4773226 ~ 4792048 (-)
CI01000018_04798056_04800698 C1QTNF9 coding upstream 27244 4797978 ~ 4800698 (-)
CI01000018_04803745_04804788 TAGLN3B, TAGLN3 coding upstream 32383 4803117 ~ 4804796 (-)
CI01000018_04807843_04810778 ABHD10B, ABHD10 coding upstream 36832 4807566 ~ 4810778 (-)
CI01000018_04811791_04814940 ACOT9.2, ACOT9.1, ACOT9 coding upstream 40904 4811638 ~ 4816478 (-)
G105336 NA non-coding downstream 17588 4741661 ~ 4741921 (-)
G105209 NA non-coding downstream 108162 4649881 ~ 4651347 (-)
G105328 NA non-coding downstream 137881 4621351 ~ 4621628 (-)
G105199 NA non-coding downstream 144129 4612697 ~ 4615380 (-)
G105213 NA non-coding downstream 171734 4584628 ~ 4587775 (-)
G105413 NA non-coding upstream 487578 5258312 ~ 5258511 (-)
G105219 NA non-coding upstream 511972 5282706 ~ 5284386 (-)
G105464 NA non-coding upstream 594316 5365050 ~ 5489735 (-)
G105526 NA non-coding upstream 723102 5493836 ~ 5494106 (-)
G105939 NA non-coding upstream 895119 5665853 ~ 5666088 (-)
G105200 NA other downstream 513499 4243467 ~ 4246010 (-)
G105104 NA other downstream 741692 4007697 ~ 4017817 (-)
G104968 NA other downstream 1258995 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 2358606 2389201 ~ 2488018 (-)
G103842 NA other downstream 2799451 1959497 ~ 1960058 (-)
CI01000018_04856240_04875704 DAP other upstream 84347 4855081 ~ 4876532 (-)
CI01000018_06021105_06025859 NA other upstream 1120602 6020861 ~ 6025876 (-)
G106538 NA other upstream 1759713 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 1869878 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023431 CR352265.3 coding NC_007135.7 CM002908.2 21841238 ~ 21847945 (-)