CI01000018_04807843_04810778 (ABHD10B, ABHD10)


Basic Information

Item Value
gene id CI01000018_04807843_04810778
gene name ABHD10B, ABHD10
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4807566 ~ 4810778 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_04807843_04810778.mRNA
ATGGCAGCGGTGGTGTTGAAGCATTGTTGGAAAGGATTTTTGCTGAACTCGAGCAATGGAGCTGTCGGCGCTGTCAGGTCGAAGATTTTGGAGGGAGTTAGACAGAAATCTACAGTACAGTATATATCACGGCCAGATCAACCAAAGCTGGCCTATCGTAGAATGAAGGGAAAGAGTCCTGGTGTTGTGTTCCTGCCTGGATATGGATCCAACATGAGCGGACAGAAGGCAGAGGCCCTGGAGGAGTTCTGCAGATCTTTAGGTCATGCCTACCTGAGGTTTGATTACTCTGGTCATGGAGCTTCTGAAGGTGTATTTTCAGAAGGCACCATTGGAACTTGGAAAAAAGATGTCCTGTTCATGTTAGATGAACTTGCTGAAGGTCCTCAGATTCTTGTCGGCTCCAGTATGGGTGGCTGGCTGATGCTTTTGGCTGCTATCGCTCGCCCAGAGAAGACAAAAGCATTAGTGGGCATTTCCACAGCAGCGGATCATTTTGTTACAGCCTTTAAGACACTTCCTATAGAGGTGAGAAAAGAGTGCGAGGACAAGGGTTCATGGACGGTCCCCACGAAAAGTAATGAGGAGGGCGTGTACACTGTGAGTATGGACTTCCTGCGTGAAGCGGAGAACCACTGCATCCTGCAGAGCCCCATCCCTATCACCTGCCCTGTTCGTCTCATTCACGGCCTGAAAGACGAGGATGTGCCCTGGCACATCTCCATGCAAGTAGCCGAGCGTATACTGAGCTCCGATGTGGACATCATTCTACGGCGCCACGGCCAGCACCGCATGGCTGAAAAAGATGACATCAAGCTCATCGTCTACACCATCGATGACCTCATAGACAAGCTTACTACCATGGTGTGAGCCACCATTTGGGATCAGGTTACCAAGCAACTAGCCTTAAGACCCTCTCCCACTTGCTTTTGCCAAACACCCACTTCCTGTTTTGTCTTGCAAGACCAGAACGATGGAAAGAGTGAATGTGGGAGGACAAAATCTTTTCTTTTACATGTTTACTCAGTACAATGCTGTGCCATTAAACCTTTAAGGTAAAGCTGCTGTTTGTCTAGCAAAAGGTTTGTCTAGATCTCCTGTGCCTTTTTTTTTTTAACCATTTTTCAAACTGTTTTATGGAAATAAA

Function

symbol description
abhd10b Orthologous to human ABHD10 (abhydrolase domain containing 10, depalmitoylase).
abhd10 Enables hydrolase activity, hydrolyzing O-glycosyl compounds and palmitoyl-(protein) hydrolase activity. Involved in glucuronoside catabolic process and protein depalmitoylation. Located in cytosol and mitochondrion.

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG:

id description
K13702 ABHD10; abhydrolase domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_04807843_04810778.mRNA True 1147 mRNA 0.48 5 4807566 4810778

Neighbor

gene id symbol gene type direction distance location
CI01000018_04803745_04804788 TAGLN3B, TAGLN3 coding downstream 2770 4803117 ~ 4804796 (-)
CI01000018_04798056_04800698 C1QTNF9 coding downstream 6868 4797978 ~ 4800698 (-)
CI01000018_04773554_04792048 SPATA13 coding downstream 15518 4773226 ~ 4792048 (-)
CI01000018_04759598_04770734 TMPRSS7 coding downstream 36832 4759509 ~ 4770734 (-)
CI01000018_04738374_04757471 NA coding downstream 50095 4738280 ~ 4757471 (-)
CI01000018_04811791_04814940 ACOT9.2, ACOT9.1, ACOT9 coding upstream 860 4811638 ~ 4816478 (-)
CI01000018_04817413_04821724 ACOT9.1 coding upstream 6125 4816903 ~ 4821724 (-)
CI01000018_04825678_04826167 NA coding upstream 14663 4825441 ~ 4826167 (-)
CI01000018_04827973_04829957 NA coding upstream 17195 4827973 ~ 4829957 (-)
CI01000018_04832762_04833610 NA coding upstream 21576 4832354 ~ 4833768 (-)
G105350 NA non-coding downstream 39180 4767611 ~ 4768386 (-)
G105336 NA non-coding downstream 65645 4741661 ~ 4741921 (-)
G105209 NA non-coding downstream 156219 4649881 ~ 4651347 (-)
G105328 NA non-coding downstream 185938 4621351 ~ 4621628 (-)
G105199 NA non-coding downstream 192186 4612697 ~ 4615380 (-)
G105413 NA non-coding upstream 447534 5258312 ~ 5258511 (-)
G105219 NA non-coding upstream 471928 5282706 ~ 5284386 (-)
G105464 NA non-coding upstream 554272 5365050 ~ 5489735 (-)
G105526 NA non-coding upstream 683058 5493836 ~ 5494106 (-)
G105939 NA non-coding upstream 855075 5665853 ~ 5666088 (-)
G105200 NA other downstream 561556 4243467 ~ 4246010 (-)
G105104 NA other downstream 789749 4007697 ~ 4017817 (-)
G104968 NA other downstream 1307052 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 2406663 2389201 ~ 2488018 (-)
G103842 NA other downstream 2847508 1959497 ~ 1960058 (-)
CI01000018_04856240_04875704 DAP other upstream 44303 4855081 ~ 4876532 (-)
CI01000018_06021105_06025859 NA other upstream 1080558 6020861 ~ 6025876 (-)
G106538 NA other upstream 1719669 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 1829834 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023434 tagln3b coding NC_007135.7 CM002908.2 21917012 ~ 21934571 (-)