CI01000018_04832762_04833610


Basic Information

Item Value
gene id CI01000018_04832762_04833610
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4832354 ~ 4833768 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_04832762_04833610.mRNA
ACTTCCGAGAAAGTACAGTCCGAGTTTACAGCCTGTGCAAAATGAAAGCTTGCTTGAGGTTGTCTAAAGTTTCATGTTTTTGCTCCTGTGTTCAGCTGTGTTTGGATTAAAGTTTTCTTTGCTAAACTAGCCAACATACCGGCGATCTTTGCAAAACAATGGATGTTCAGAAGTATTTGGCACGTATCGGCTGTTCTGGCCCATGTCCTCCGACATTGGAGACATTACGATACGTTCACCTGAATCACTTGATGGCAGTTCCCTTTGAGAATCTCACTATTCATATCGGAGAGCGGGTCAGGCTTGAATTGCCACTTCTATATGAAAAAATCGTCCTCATGCGCCGTGGAGGATTCTGCTTTGAGAATAATGGACTCTTCTCTTGGCTTTTGTCTCAGCTGGGCTTTAACGTGACTATTCTCTCCGCACAGGTCAAGAATCGGTTCACCGGCGCTTACGGACCTCCCTTCGACCACTTCATCATGATGGTGAAGCTGGATGGACACAGATGGCTCTGTGATGTTGGGTTTGGATACGGTTTCCAGCTCCCTCTCTCTCTTGAGACAGACAGTCCTCAAGCCCAGAGCCATGGAGTGTATCGCCTCAGATCTCAGGGAGACTTTATTTTCATGGAAATGAAATCTGAGACTGAGGTATTAAAGAGTGCAGAAGAATGTTGGTTGGAGCAGTACAAATTCACGCTGGAGCCATGTGAAAGAGATGATTTCAGAGCCATGTGTGACTACCATCAGAGTTCTGTTAGCTCGATTTTCTTCTGCAAGTCTCTCTGTTCACTCTTATTGCCCACTGGAAGAATCACAATCATGGGCCGCAGACTGATTATAACCACTTTGACCTCAGTGGATGGACACCAAGCTATGAAAACCACAACAGATCTTTCAGATGAAGAAATTACAGAGTTGTTGAGAGAGAAGTTTGGAATTGTTCTTCCTTCTCCACTCACTCCAAAAGATGTTGAGATTGTACCACCACCAGTTACTTATTAAGTGATTGTTTATTTGTTGGGTCTTTCATGCTCTTTAAGTTTTATGAATAACATTATTGTTTAACCTATAGTAGATTAAGTGGTTGAGGGTTATGCCTTTTTTATTTAGTAATGTATCTCAGTGGTAACTCAGTAGTTGTTTGTGCTAGATCTCTCAAAATTTGATACATGTTAGCCACATTTGTCTACTACAAATAGCTTACTTGGACGTACTACACAATCACAGATTATGTGAGTTAATGTCAAACACAAAGAGTTCCATTGTTACAACCTATCCCACTACTGAGATGAGTTAGCTGGGATTAGATGTAGCCTAACAAAGCTGAAATTCGCTGAAATAAGAGAAACACAATTTAAATTTATGCAAGAATGTTATTGAAGAACAAAGAATGATCATGTTTTGAATAAA

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_04832762_04833610.mRNA True 1415 mRNA 0.41 1 4832354 4833768

Neighbor

gene id symbol gene type direction distance location
CI01000018_04827973_04829957 NA coding downstream 2397 4827973 ~ 4829957 (-)
CI01000018_04825678_04826167 NA coding downstream 6187 4825441 ~ 4826167 (-)
CI01000018_04817413_04821724 ACOT9.1 coding downstream 10630 4816903 ~ 4821724 (-)
CI01000018_04811791_04814940 ACOT9.2, ACOT9.1, ACOT9 coding downstream 15876 4811638 ~ 4816478 (-)
CI01000018_04807843_04810778 ABHD10B, ABHD10 coding downstream 21576 4807566 ~ 4810778 (-)
CI01000018_04856240_04875704 DAP coding upstream 22042 4855081 ~ 4876532 (-)
CI01000018_04887828_04984375 CTNND2 coding upstream 53204 4886972 ~ 4984400 (-)
CI01000018_05008490_05017148 NA coding upstream 174641 5008409 ~ 5018442 (-)
CI01000018_05037255_05110400 CTNND2A coding upstream 203487 5037255 ~ 5110400 (-)
CI01000018_05163296_05172812 NA coding upstream 329259 5163027 ~ 5172812 (-)
G105350 NA non-coding downstream 63968 4767611 ~ 4768386 (-)
G105336 NA non-coding downstream 90433 4741661 ~ 4741921 (-)
G105209 NA non-coding downstream 181007 4649881 ~ 4651347 (-)
G105328 NA non-coding downstream 210726 4621351 ~ 4621628 (-)
G105199 NA non-coding downstream 216974 4612697 ~ 4615380 (-)
G105413 NA non-coding upstream 424544 5258312 ~ 5258511 (-)
G105219 NA non-coding upstream 448938 5282706 ~ 5284386 (-)
G105464 NA non-coding upstream 531282 5365050 ~ 5489735 (-)
G105526 NA non-coding upstream 660068 5493836 ~ 5494106 (-)
G105939 NA non-coding upstream 832085 5665853 ~ 5666088 (-)
G105200 NA other downstream 586344 4243467 ~ 4246010 (-)
G105104 NA other downstream 814537 4007697 ~ 4017817 (-)
G104968 NA other downstream 1331840 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 2431451 2389201 ~ 2488018 (-)
G103842 NA other downstream 2872296 1959497 ~ 1960058 (-)
CI01000018_06021105_06025859 NA other upstream 1057568 6020861 ~ 6025876 (-)
G106538 NA other upstream 1696679 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 1806844 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023440 si:rp71-1f1.5 coding NC_007135.7 CM002908.2 22002090 ~ 22003031 (-)