CI01000018_04856240_04875704 (DAP)


Basic Information

Item Value
gene id CI01000018_04856240_04875704
gene name DAP
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4855081 ~ 4876532 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_04856240_04875704.mRNA
ACAATGTTTATTTGAGGAACTCCATTGTGTTATGTAGGCCTACTTGAGCAAGACCGACATGATTCACTTTCCCCCAGAGTGTAAAATTGTGTTCATTGTATTTTTGATGAGAACAGTGTGTTTTCTTTGCTACTTATAGCATCTAACCCTGTTTGGTGCAGTAGTGATTTGCAGTCTAAATGACCACTCACACTGTCAGCAGTGTTCTTGAATAAAGCAAACAGCTTTCCAGACATAAATAACTCTTTTTTGAAAAGGTTGTTATGTCTGCTAACATTTTCCAGACATTATATTTATCCTTCATACATCTTAACGATGAGTTCATTGACTCCATGATGGAGATCTCATCTCATGATGTGAATAATATTTTGCATGACTTTTAACATATTAAAAGTAGTACTATTGATTTCTTTAGGGGTGCTTTTTCTAATTAAAAAAATGATTTATTAATTTTTTTTCTTGCTACTTTTTCTTTTGATGAAAGCAAAGAACATTTTCTTCCCGCTCTCTATCTAAAATATGCGACCTGTGGGCATATTAATAAAAGTTACACAGCTCTGCATGCTGATTTGTATTTTCTGATTTTCCCCGTATGTACCATTGGACTTTCCATAGTAAAGAGGTGGAACGTCCTTTCTCAATAAACGCTCTTATTGGTTGTAGCGACCACTGCCGTCATCACGCACCGTTGCCAAACAATGGGCAGGGAAAAGCCACGTTGACGAACTCGACAGTAGTCTGCGTTATTTTCATCCAGGAAACAGAAGGATTGTTTTGTATTTTGAAGACAACGAAGAAATTCTTTAGAAGAAGCGCTTGACAGCAACCATGTCATCGCCGCCCAAAGAGAAAATCGAAACAAAAGCTGGACATCTCCCTGCTGTGAAAGTAGGAGGAGGCATGAGGATAGTTCAGAAGCACCAGTCTGCAAATGACGTGCCAGACAAGAAACAAGATGAGAAAGACAGTAAAGAATATGAGACTGAGCCCAGAGAGATGGCCTGTAAGCAGGTGGCTTCTGATGAAAAAATTGCACATTTGTCGAGGCAAGTCAAGTGGCACTGTCTGGGGACCACCTGTCAAATGCAATTTGGTCTTCTCAGATGGATGGATGGCAAATGGAATAGCTCTGAGATGCTAATGTGGTGTGCTATGCTGGTGAGCTCACTCTTTGACGTCCCACCAAAGCTGCCTGTTGTGGTCTCAGGAGTTGTCACTAAGGGGGATAAAGACTTCACTCCTGCTGCTGCCCAGGTGGCCCATCAGAAACCTGTGCCCTCGGTACAGAAGCTTCCTTCGGCCCACCACATCAACCAGCACATCCACCAGCCTCGGAAGTGAGCCCTTAACCCAGCTCTAGACCATCATGGGCCCCCCACACGAGGCCAGGACCACACCACCCCAAACACCTGCTCAGGTTGCCAGGGATCTCTTGCCGTCAAGCATTCCGTACACACCCTCCCCCCACCCCCTTCCGTCTGTGCCTGCAAGTGTCCTGTTTTGACCAGTATCATGACAAACGTTCCATTTTCTCTTACCTGTAAATCATTGCAACACTAAAATTGAAGGCTCCATTGCGAATCACTAATCAGAAACATGTTAATTCTGTGGGTTCATTTCATGAGGGATATGTGGAGCTGTGTTTTATTTTGTTTTAATTTTGTTTTACATGAATAGTTCCAGAGAGATGTAAATTGTATAAATCATTTTTTTGAACTTGGTGAATGTTGTATATTAGGCATTAGGTACTAGGTGTGGTTATCTGAATAAA
>TU119553
AAACAATGGGCAGGGAAAAGCCACGTTGACGAACTCGACAGTAGTCTGCGTTATTTTCATCCAGGAAACAGAAGGATTGTTTTGTATTTTGAAGACAACGAAGAAATTCTTTAGAAGAAGCGCTTGACAGCAACCATGTCATCGCCGCCCAAAGAGAAAATCGAAACAAAAGCTGGACATCTCCCTGCTGTGAAAGTAGGAGGAGGCATGAGGATAGTTCAGAAGCACCAGTCTGCAAATGACGTGCCAGACAAGAAACAAGATGAGAAAGACAGTAAAGAATATGAGACTGAGCCCCCACCAAAGCTGCCTGTTGTGGTCTCAGGAGTTGTCACTAAGGGGGATAAAGACTTCACTCCTGCTGCTGCCCAGGTGGCCCATCAGAAACCTGTGCCCTCGGTACAGAAGCTTCCTTCGGCCCACCACATCAACCAGCACATCCACCAGCCTCGGAAGTGAGCCCTTAACCCAGCTCTAGACCATCATGGGCCCCCCACACGAGGCCAGGACCACACCACCCCAAACACCTGCTCAGGTTGCCAGGGATCTCTTGCCGTCAAGCATTCCGTACACACCCTCCCCCCACCCCCTTCCGTCTGTGCCTGCAAGTGTCCTGTTTTGACCAGTATCATGACAAACGTTCCATTTTCTCTTACCTGTAAATCATTGCAACACTAAAATTGAAGGCTCCATTGCGAATCACTAATCAGAAACATGTTAATTCTGTGGGTTCATTTCATGAGGGATATGTGGAGCTGTGTTTTATTTTGTTTTAATTTTGTTTTACATGAATAGTTCCAGAGAGATGTAAATTGTATAAATCATTTTTTTGAACTTGGTGAATGTTGTATATTAGGCATTAGGTACTAGGTGTGGTTATCTGAATAAAGAGTTAATATAAAACCACGCACGCCTTTTTGCTCTTAAAAACGCATTCATGAGCTACAGTTGCATTATCTGATGGAAATATCAGAGCTTCGACTAATAAGTAGTGACATATAAAGCTGAAATTAACTACAAAACCATTTTTTTGTTCAGTAGTTCAGTTTGAATTAATTGCTAAAAGGTATGGAGAATAAAATGAAGTGTTTTAATATTTTTTGCTTAAAAAAAAAAAAAACATTCATATGCTAGAATTGCATTTCCTTAAGAAAATAGTCAGTGATTGCAAGATAGCACATGAATAGTGATAGTGAAATAAGAAGAGAAAAGACCAATTGCAATACACTATGTAAATATTATAGTGACTTCATTGATTCCAGTTAGTGTGTGTGTGTGTGTGTATGTATGTATATGTCATTCATATATATATATATATATATATATATACGCACAGACACACACACACACATATATATCATAAAAACACATTTTTCTATTTTGCATTGTCTATATATATATATATATAGCAGAAATTCCATACATATAGAAATTCCAGGATTTCCATATGCTCTTTGCTTAAACTATATGCTAGAATTGCATTTCCACAAGAAAGAATAGACTGAACAATGTTATTTATGCCATGTTAGCTGTTTGTTTATGACAGCGATTTGAGCTGAATTAATTGAATTTGTGGAGGGTAAAAAGTAGAGGGATTTCAATACTCACATTGCAAGCA

Function

symbol description
dap Predicted to enable death domain binding activity. Predicted to be involved in apoptotic signaling pathway; cellular response to amino acid starvation; and negative regulation of autophagy. Orthologous to human DAP (death associated protein).

GO:

id name namespace
GO:0070513 death domain binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_04856240_04875704.mRNA False 1771 mRNA 0.42 5 4855810 4876532
TU119553 True 1618 TUCP 0.39 4 4855081 4875839

Neighbor

gene id symbol gene type direction distance location
CI01000018_04832762_04833610 NA coding downstream 22042 4832354 ~ 4833768 (-)
CI01000018_04827973_04829957 NA coding downstream 25853 4827973 ~ 4829957 (-)
CI01000018_04825678_04826167 NA coding downstream 29643 4825441 ~ 4826167 (-)
CI01000018_04817413_04821724 ACOT9.1 coding downstream 34086 4816903 ~ 4821724 (-)
CI01000018_04811791_04814940 ACOT9.2, ACOT9.1, ACOT9 coding downstream 39332 4811638 ~ 4816478 (-)
CI01000018_04887828_04984375 CTNND2 coding upstream 10440 4886972 ~ 4984400 (-)
CI01000018_05008490_05017148 NA coding upstream 131877 5008409 ~ 5018442 (-)
CI01000018_05037255_05110400 CTNND2A coding upstream 160723 5037255 ~ 5110400 (-)
CI01000018_05163296_05172812 NA coding upstream 286495 5163027 ~ 5172812 (-)
CI01000018_05222497_05243379 ZC2HC1A coding upstream 345965 5222497 ~ 5243379 (-)
G105350 NA non-coding downstream 87424 4767611 ~ 4768386 (-)
G105336 NA non-coding downstream 113889 4741661 ~ 4741921 (-)
G105209 NA non-coding downstream 204463 4649881 ~ 4651347 (-)
G105328 NA non-coding downstream 234182 4621351 ~ 4621628 (-)
G105199 NA non-coding downstream 240430 4612697 ~ 4615380 (-)
G105413 NA non-coding upstream 381780 5258312 ~ 5258511 (-)
G105219 NA non-coding upstream 406174 5282706 ~ 5284386 (-)
G105464 NA non-coding upstream 488518 5365050 ~ 5489735 (-)
G105526 NA non-coding upstream 617304 5493836 ~ 5494106 (-)
G105939 NA non-coding upstream 789321 5665853 ~ 5666088 (-)
G105200 NA other downstream 609800 4243467 ~ 4246010 (-)
G105104 NA other downstream 837993 4007697 ~ 4017817 (-)
G104968 NA other downstream 1355296 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 2454907 2389201 ~ 2488018 (-)
G103842 NA other downstream 2895752 1959497 ~ 1960058 (-)
CI01000018_06021105_06025859 NA other upstream 1014804 6020861 ~ 6025876 (-)
G106538 NA other upstream 1653915 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 1764080 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location