CI01000018_05163296_05172812


Basic Information

Item Value
gene id CI01000018_05163296_05172812
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 5163027 ~ 5172812 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_05163296_05172812.mRNA
AAAAAAAAGGTTGACACAGGGCAATCCACTCCAGAGGCAATCCACTCAGAGATATTTAAATGCACCATTTGCCCACTCTTGTACTATACCAAGAGTATGGAATATGGCAGCATTACCTTTACCAGGGCAAACCACAGTGAATGAAATGAGCTGTATCATTGAAAGTTGCGGCAACACATTACCCAGCAGCACATTTGTTTGCATGAAAAATCTGCTGAGCCAGAATGTGAAGATGGAGATGGTGTCAAAAACAGCTAGACAGCAGGCATACCCACAAGACATCTCTGCACGTTGTCTGCCTGAACTTCTGAATTATTTCCATGAGTCTTTTATTCTTGTGGAAGTCATGCCAGTTCCAGAACAGCCTGCTGAAGCAGAGAACGCCACCATGCTCAGCCCAGGACTGAATGCTTCTAATGGGGATGGATCCGAGACTGAGACTACCTCTGCCATTCTAGCCTCCGTTAAAGAGCAGCTCAGCAGTAAAAGGCCACCTGTGTTTTACTCGATGATGGATTTAGTTCAGGCAGCCATTCCCACCCCACCTGGAACGGCCCGTAAGATTGTGCAGGTGGCTCTTCGGCCCAATCCGTCACAGAAATTAGCCATTAGTTTTATTCATATACAACGGGTTCTCGCTGAGTTGCATGGAGTACAGACGGCTAGCTCATCACAGCCTCAAAATGTTGATGGCTTCATGTACTGCTTTAATAAAAGCTACATTAAAATCAGAGGTGCTGATGCAGCGTTTCACCGTGCAGAACTGAGCATCTGTACAACGCAGTGCTGGGGTTTCATGGTAGATTTGATTAATAAACCTGTGTATGTCTATCTCAACCACCTCCTGCCCATCCCGCCACTCATGCACGTCGAGCAGGGGCCTGTAGGATTACACCAGAGAGCAATCACCATAAACAGCACCATCATTGTAATCACTATCCTTATCACCGCATCCATCAAAATGGAGGCGGCAGTTGTGTGTCCCAATCAAGTTGCCCGTGTTAGGCGATCTTATAAATGAAGCCATCTTATTTTGGACGCAAGGGCTCGCTCAAAGAGATTGATTGGGAAGGGGCTGCATCTACCAAATTGAGCCGGTGTAAGTGGATGCGTGGGACAGGTCTCAGTGAATAAGCTGAGATGAAAGGCAAGCTTTTATTTTGATATTGAATGACACGGCGCACAGTGTTTCTGTGATCAGTGCATTTGTTTCACATGAGACTGCTGTGGATTGTATTACTGAAAAGAAACTCAGCAAATAGAAGGTGACTTATAGAGGTGACTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_05163296_05172812.mRNA True 1290 mRNA 0.46 6 5163027 5172812

Neighbor

gene id symbol gene type direction distance location
CI01000018_05037255_05110400 CTNND2A coding downstream 52627 5037255 ~ 5110400 (-)
CI01000018_05008490_05017148 NA coding downstream 144585 5008409 ~ 5018442 (-)
CI01000018_04887828_04984375 CTNND2 coding downstream 178627 4886972 ~ 4984400 (-)
CI01000018_04856240_04875704 DAP coding downstream 286495 4855081 ~ 4876532 (-)
CI01000018_04832762_04833610 NA coding downstream 329259 4832354 ~ 4833768 (-)
CI01000018_05222497_05243379 ZC2HC1A coding upstream 49685 5222497 ~ 5243379 (-)
CI01000018_05412935_05458370 NA coding upstream 239898 5412710 ~ 5458442 (-)
CI01000018_05472889_05494284 NA coding upstream 299839 5472651 ~ 5495370 (-)
CI01000018_05528561_05576788 ZFHX4 coding upstream 355749 5528561 ~ 5576788 (-)
CI01000018_05588289_05597432 NA coding upstream 415147 5587959 ~ 5597822 (-)
G105350 NA non-coding downstream 394641 4767611 ~ 4768386 (-)
G105336 NA non-coding downstream 421106 4741661 ~ 4741921 (-)
G105209 NA non-coding downstream 511680 4649881 ~ 4651347 (-)
G105328 NA non-coding downstream 541399 4621351 ~ 4621628 (-)
G105199 NA non-coding downstream 547647 4612697 ~ 4615380 (-)
G105413 NA non-coding upstream 85500 5258312 ~ 5258511 (-)
G105219 NA non-coding upstream 109894 5282706 ~ 5284386 (-)
G105464 NA non-coding upstream 192238 5365050 ~ 5489735 (-)
G105526 NA non-coding upstream 321024 5493836 ~ 5494106 (-)
G105939 NA non-coding upstream 493041 5665853 ~ 5666088 (-)
G105200 NA other downstream 917017 4243467 ~ 4246010 (-)
G105104 NA other downstream 1145210 4007697 ~ 4017817 (-)
G104968 NA other downstream 1662513 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 2762124 2389201 ~ 2488018 (-)
CI01000018_06021105_06025859 NA other upstream 718524 6020861 ~ 6025876 (-)
G106538 NA other upstream 1357635 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 1467800 6639207 ~ 6649971 (-)

Expression


Co-expression Network