CI01000018_05870993_05880212 (SGK3)


Basic Information

Item Value
gene id CI01000018_05870993_05880212
gene name SGK3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 5870313 ~ 5880705 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_05870993_05880212.mRNA
AGTGCAGTGTTTTCTAAAAATACCTCATATACCTCAGAGGGGTATGTGGCCCACCCAGTGAGCAATCGTGTGTTGCTCTTGACAGAGGGAGTTTATGGAAGTGGCATATGAAAGAAGAACATCCCCGTTTGCTCCCTCCCAGTTGGAGAGAAGCAGAGGGGAGGATAAAAGAATGTGAGAAAAAGAGAGGTGGAGACTCATCGCTTGGCTGGCCAGACTGAGGCTCCTCTCTGTGTTCATGCCACACTTGATTAGTGACTCTCAGTGGCCTTCCTGTCCTGTCATGCAAGGCCCAAAGAGCCCTCTGGAGCTAAAGCGGACGCTGGACACTGCTGAAAAGAGCACTTGACGGTGGTAGAACATCTTGCTTATGTTTATGTTTTTCATAGGACCAGAATGGAGAGTTTCAATCAGAATCAGGTGTGCCCAAGAAGCAGGGGGGCGTTCTGAGGACCTGTGAGCTGTTGCTTTTGAGATTCTGAGAGGCCTCAGGATGGAGGAGCAACCAAGCTGCCCCAATGTCAGCATTCCCTGCTACAACGAACAGAGAGACAAGAAGAAACGCTATACTGTTTACAAAGTAATGGTCCGTGTTGGAAGTCATGAATGGTTTGTGTTCCGGAGATACGCAGAATTTGACAAACTGTACAACACTCTGTGGCTTTGTATCGCCTCAGTCAGACCTCTAACATGTGAATGTTCATTTCAAATGCGCAGTCCTGATGTCAAAGACTTTCTGCAGATGGACAAATCTAAAAACTTCTCTGATGCCTCAGAGGATGAAGATGACAAGAGTAACTCTACCTCTAGAAACATTAACCTGGGACCATCTGCAAACCCACAAGCAAAGCCTACTGACTTTGACTTTCTTAAAGTCATAGGAAAGGGAAGCTTTGGAAAGGTTCTCCTTGCAAAGAGGAAGCGGGATGGGAAGTGTTATGCCATCAAAGTCTTGCAAAAAAAGGTCATTTTAAACAGGAGAGAGCAAAAGCACATTATGGCTGAACGTAATGTGTTGCTGAAGAATGTTAAACACCCCTTCCTGGTTGGACTGCACTATTCTTTTCAGACAACAGACAAATTATACTTTGTCCTGGATTTTGTCAATGGTGGAGAACTTTTCTTTCACTTGCAAAAAGAGCGGACCTTTCCTGAACCCAGAGCCAAGTTCTACATCGCCGAGATGGCAAGTGCTCTGGGTTACTTGCACTCTCTTAACATTGTTTACAGGGATTTGAAACCAGAAAATATCCTGCTGGACTCTCAAGGACATATAGTCTTGACTGACTTTGGACTGTGTAAAGAGGGAATCTCCCAAGCAGACACAACGACCACATTTTGTGGGACACCTGAGTATCTAGCTCCAGAGGTACTCAAGAAACAACCCTATGATAACACTGTGGACTGGTGGTGTCTGGGATCTGTGCTGTATGAAATGCTTTATGGGCTGCCTCCGTTCTACAGCAGGGACACACATGAGATGTATGACAACATTCTTCACAAGGAGCTTGTCATGCGCCCTGGGGCATCCACAGCTGCCTGGTCCATCCTTCAGGCCCTTCTGGAGAAAGACCACACCAGGAGGCTTGGCTTCATAGATGACTTTAATGAAGTCAAAAGACATGATTTTTTCTCATCCATTAACTGGGATGACCTTGAACAGAAAAAGCTTCCTCCTCCATTCAACCCTAGTGTGGAATCCCAGTATGACATCTCTAACTTTGATCCCGAGTTTACAGAGGAAACCGTGCCAAACTCTGTGTGCTTCTCTTCAGGGCAGTCAATCGTCAATGCTAGTGTTATGGAAGCTGATGATGCCTTCCTGGGATTTTCTTACGCTCCGCCATCAGAAGATTCTTTCCTGTAAGGGTGGCGCTGCTAATCCACAGAGAGCTGCATTAAAAGTCTGTGATCGTTCTCTCTGATGAAAGGGAAGAATTTTGCTGAGCATGATATCCTGATCGGAGGGTGGACCCTTTTGTTTCCTAACAGAAGCAGTACATAAACCTTTTGGGATGCAGGGTGTTTCAAACTGTATTTTTATGCGTAAATAACATTATATTTTGTTTAACATTGAACGGCCTTACCTGAGCGATTAGCTCAGAAGCTGAAGTGATGTTGTTTTCCTGAGAATATTTTCAAGGGCTGATGATACTTGTAAACAAAACATCCACTTTGACACATTCCTTGTTTTTGCCCCAACTCTCACACTTGATTGCTTATAATATTGTGCAGTATATGAACAATTAAGTTTTTGTAGTTTAGTCTTTTATTAGAAATTTACTATGGAAAAAAATGTTCATATAATGTCAACACAAGCAATTAATTTATTGCTTGACATATTAATATATATATTTCCTTTATACTGTTTAGTATGTAAGTGAGTAGACAGACCTTTAAGCTGTTTTGAAATGAATTTCGATAAACCCTGTAAGTTACGGGTCATCTACAGCCATAGTACAGTGTAAATTATACATTTGTCGCTATTTGCATTTAGATTTTAATGAGTTAGTAGCACTTAAATACTGACAATGACCCTGTAATAAA

Function

symbol description
sgk3 Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Orthologous to several human genes including C8orf44-SGK3 (C8orf44-SGK3 readthrough).

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process

KEGG:

id description
K13304 SGK3; serum/glucocorticoid-regulated kinase 3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_05870993_05880212.mRNA True 2547 mRNA 0.43 14 5870313 5880705

Neighbor

gene id symbol gene type direction distance location
CI01000018_05864737_05869576 MCMDC2 coding downstream 737 5864455 ~ 5869576 (-)
CI01000018_05827740_05839214 PIGN coding downstream 31099 5827576 ~ 5839214 (-)
CI01000018_05820608_05821533 NA coding downstream 48780 5819910 ~ 5821533 (-)
CI01000018_05803227_05816159 HNF4G coding downstream 53820 5802909 ~ 5816493 (-)
CI01000018_05667742_05668807 NA coding downstream 201073 5667619 ~ 5669240 (-)
CI01000018_05905787_05908656 NA coding upstream 24820 5905525 ~ 5908682 (-)
CI01000018_05910381_05911415 RRS1 coding upstream 29413 5910118 ~ 5911415 (-)
CI01000018_05969322_05974836 ARX, ARXA coding upstream 88584 5969289 ~ 5975001 (-)
CI01000018_05990359_05991280 NDUFB4 coding upstream 109591 5990296 ~ 5991404 (-)
CI01000018_05992061_05992357 NA coding upstream 111290 5991995 ~ 5992357 (-)
G106017 NA non-coding downstream 22754 5847345 ~ 5847559 (-)
G106013 NA non-coding downstream 70927 5799157 ~ 5799386 (-)
G105956 NA non-coding downstream 148464 5721518 ~ 5721849 (-)
G105948 NA non-coding downstream 173203 5696758 ~ 5697110 (-)
G105939 NA non-coding downstream 204225 5665853 ~ 5666088 (-)
G106077 NA non-coding upstream 162455 6043160 ~ 6043390 (-)
G106096 NA non-coding upstream 294727 6175432 ~ 6175649 (-)
G106477 NA non-coding upstream 372094 6252799 ~ 6253046 (-)
G106479 NA non-coding upstream 387762 6268467 ~ 6268704 (-)
G106498 NA non-coding upstream 500048 6380753 ~ 6383489 (-)
CI01000018_04856240_04875704 DAP other downstream 994474 4855081 ~ 4876532 (-)
G105200 NA other downstream 1624303 4243467 ~ 4246010 (-)
G105104 NA other downstream 1852496 4007697 ~ 4017817 (-)
G104968 NA other downstream 2369799 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 3469410 2389201 ~ 2488018 (-)
CI01000018_06021105_06025859 NA other upstream 10631 6020861 ~ 6025876 (-)
G106538 NA other upstream 649742 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 759907 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_023455 SGK3 coding NC_007135.7 CM002908.2 23758510 ~ 23784701 (-)
bowfin (Amia calva) AMCG00019413 sgk3,LOC107666631,LOC106579527 coding CM030124.1 CM030124.1 19269809 ~ 19283732 (+)