CI01000018_06027217_06038423


Basic Information

Item Value
gene id CI01000018_06027217_06038423
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6026991 ~ 6038423 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_06027217_06038423.mRNA
ATGGTTCGCGCAATAAAAATGATTGACAGCTGTGACACGCCCCCAGCTGAAATCGCCGCTCTCATTGGTCATGTGGTTGTAATGGGTCACAGGGGACCATTGCATTTGTCTGACCTTTTCCAGCTGTATAATGAGGACTCTGTCCACACCCTGTGCTCAGTGTTTGAGCATGAGTGGGGAAAACAACAGAATTACAGTGAGAGGTCAGACCTAGAAGAGGATTCTGGGAGAGAGTCACTGCTGGTCTCCAGGAAAACCAATGCTGGTTACTCTCTTCTTTATGCAATATGGATGACATTCCATCCAGCCTTAGTGAAAGTTGTGCTTCTGAGACTGTCAACTGATCTTTTTAGCATTCTAGGTATTCTAACACTCAGATGGGTTATCCTGTTCTGTGAGAGGCAGGCTGTGTTTGACTGGGCCGGATACACATATTCTCTGGCGGTGTTGGGAGCAGTTTGCTGTTCCGCTGTTTCTCAGCATCACTTTGAGAAACATAGCAGGATAATAACAGCCAACACACAAGCGGTTCTGTCTGGCGCCCTCTACAGGAAGGGGACGGATGTATTAGGCGAAGTTGAATGTGTAGCAGAGCTGGTGGTCACATTGACCTGTCTTTGGTCCTGCCCATTGAGAGTCGCTCTCTATCTGGGCTTACTGTGGGGAGAATTGGGCCCTGGCGTGCTGGTGGGGGTGGTATTGCTACTAGTCCTCATCCCTGTCAACTCAGCAGTGCAGCACAAGGCCAAACAGCTTCGGAGATCTCAGCAGATCATCAGGGAAAGGAGTGAACAGCTCATCAAGGAAATGTTGCATAAATACCAGGCGCTGAAGCTTCTCGCATGGGAGTCTTGGTTCCATCAGAGAGTTACAGAGTCTCGGGCCAGGGAGCTGGAGATGCTAAGAATTCTGGGATATTTGACAGCCTTCTCTATGCTCGACTCTGTCTGTATGCCTTTTCTGGCTGGTTTCTCTAGTCTTGGTGTATTTGTGCTGGTGGATGATGGGAATGTTCTCACACCGTCTCAGATCTTTACATCCCTCTGTTTCTTCAGATTGCTCCGCCCACCTCTGCTGGCGCTCCCTGGGCTCTTGTGTGTTCTCAAGCAGAAAGTCTTTCTCACAGAGGACCTGGGCACCTCTCAGTTAGTTACTGCAAAAGGTGCTACAGAAGACATTCCACCTGACAGCTCTCAACAGCCATGTGATAGGTGTAAAGACAAGCACAGTAATTCTGATGAGAAACGAGATCACTATCTATTCCACAAAGGCAGCGGAGAGGCCCGCAGGCTGTATTTGAGGGCTTTTGGCTGGCACTGGGTGTCAGTTACCTTGCTGGTCTACCTGTCTGTGTGTGCTGTTAGTTTAGCACAGGATGCCATCCTGAGCATGTGGACTGGTGAAGCCAAAGAGGTTCAAGGCCTGGAGGGGTGGAGAGAGCTCAGAAACTCACGACTGTCTGCGTACGCACTGCTCGGACTCCTGCAAGCCTTGCTTGTGTGCTGTGCCGCCTACTGTCTGACCTGCGGTTCTCTGAGGGCGTCTCATACGCTACACTCTGAGCTGCTGTCAGATGTTCTTCACCTGCCTGTACATTCCCAGAAGATAGATGCCAGATGGTTACTGCAAGCATTCACTCAAGATATGCAAGTTGTTGATGAAGAGCTGCCAAAACATTTACACAGCTGGTTAAAGAGTCTTTTGGACACATTGAGCACCATCACTTTGATCAGCTTCATCATGCCTGTTTTCAGCCTAGCTGTGTGCCCGCTGATAATTCTCTTCTTCCGTATTCAGTCTCATTTTTCTTCAGCTCACATGCAAATTAGACACATGGAGGCAAACCCTGTTTCAGTTACTTCTCTGGAGTGTGTGACGCATTGTGTTGAAGCTCCACTTTCTGGGCCAAAACACAGGGAGGTGTGTCTGACGCACTGCCTCCAAGCCTTACATCAAAACCTGCTGGTCAAGTACAACAAAATCATCTCAGAAAGTTGGGCTGCGTTGCGGTTTGATGGTGTTGCTGGGATTGTGCTGTTCCTGGTCAGTCTGATTCTGCTTGAGACTCAACCTGGCTCAGGGCTTGTGGCTCTGGCTTTGATCTGTGCCTTTAATATTAAAGAAGCTCTTCGCCGTTACCCTCAGGCCACCTCTGATATCAGCATTGACATGCTGAGCGTGCAAAGATTTTGTGAATTTGCCAAAGTGGAAAAGGAGGCAGCATGGACAGTCACCTACAGACCACCCTTTGACTGGCCCCAGCATGGAGAGGTGAAGTTCAGGAACTATGAGTCTGAAGCCTCCTCTAACTGCACACCAGCTCTTAGAGGAATTAATCTCACCATTTTAAAAGGGGAAAAGATTGGGGTTGTAAGCAGGGGGAAGGCTGACACAGATGGCTTGGTTAGCTGTCTGTTCCGGTCAGTGGAGGCCAGGAGCGGTGCTGTGCTGATTGACGATGTAAACATCGCCCGCATGAGTCTACATGACCTTCGTAGCCGCCTGCAAATCATTTCCCAGGTTCCTGTACTGTTCTCAGGTCACCTGAGGGCTAACCTGGACCCGTTCGCTCAGCATACTGATGTGCAGGTGTGGCTGGCTCTGGAGCTCTGCCATCTCAAGGAGCGCGTTCGACAATTGCCTGCTCAGCTGCTGCACCCTGTTCAAAGAACATCTCTTGCTTTCAGCTTTGGCCAGAGGAGGCTGCTGTGTTTGGCCAGAGCCCTGCTTGCAAGGGTCAAAATCCTGCTTGTGGAAGAGGCTCTTCCTTGTGTGGACGTAGAAACGGAGGGCCTGGTCCGACAGTTGATCCACACAGAGTTTAAAGACTGCACTGTACTGTGGCTCACTCAGAACCCGCTCACTCTCATTCACACTGACAGGGTGCTGGTTTTGAATAAAGGACAAGCTGTGAAGTATGACATCCCTTCTACTGTCCTCCAGCAGGGGCCGCTGTTCAGTCAATAAGATGTGACCTTACAGTACAGTACATCCAATTATTGTTATCATTTATACTTTTCGCTGTTTTTTGCTGACTTAAAGTTATTAAATAATAAAATTACTATTTATATAATAATAAATAAGTTATTAATTTCACGTCATACATTAGGTTCCCTAAAGCACAGTTTATTGATTCTAATTAATGAAGGTTTCATATGCCTTTGGACAGAATATACTGGAGAAAAAAATTAAA

Function

NR:

description
ATP-binding cassette, sub-family C (CFTR/MRP), member 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_06027217_06038423.mRNA True 3193 mRNA 0.48 22 6026991 6038423

Neighbor

gene id symbol gene type direction distance location
CI01000018_06021105_06025859 NA coding downstream 1132 6020861 ~ 6025876 (-)
CI01000018_05997348_06004889 NA coding downstream 22102 5997154 ~ 6004889 (-)
CI01000018_05993799_05995338 NA coding downstream 31653 5993741 ~ 5995338 (-)
CI01000018_05992061_05992357 NA coding downstream 34634 5991995 ~ 5992357 (-)
CI01000018_05990359_05991280 NDUFB4 coding downstream 35587 5990296 ~ 5991404 (-)
CI01000018_06052815_06056229 NA coding upstream 14288 6052711 ~ 6056354 (-)
CI01000018_06057137_06059021 NA coding upstream 18463 6056886 ~ 6059075 (-)
CI01000018_06066391_06085051 NA coding upstream 27968 6066391 ~ 6085051 (-)
CI01000018_06086167_06089014 EIF1AX coding upstream 47649 6086072 ~ 6089014 (-)
CI01000018_06095005_06111764 RPS6KA3, RPS6KA3A, RPS6KA3B coding upstream 56408 6094831 ~ 6111764 (-)
G106017 NA non-coding downstream 179432 5847345 ~ 5847559 (-)
G106013 NA non-coding downstream 227605 5799157 ~ 5799386 (-)
G105956 NA non-coding downstream 305142 5721518 ~ 5721849 (-)
G105948 NA non-coding downstream 329881 5696758 ~ 5697110 (-)
G105939 NA non-coding downstream 360903 5665853 ~ 5666088 (-)
G106077 NA non-coding upstream 4737 6043160 ~ 6043390 (-)
G106096 NA non-coding upstream 137009 6175432 ~ 6175649 (-)
G106477 NA non-coding upstream 214376 6252799 ~ 6253046 (-)
G106479 NA non-coding upstream 230044 6268467 ~ 6268704 (-)
G106498 NA non-coding upstream 342330 6380753 ~ 6383489 (-)
CI01000018_04856240_04875704 DAP other downstream 1151152 4855081 ~ 4876532 (-)
G105200 NA other downstream 1780981 4243467 ~ 4246010 (-)
G105104 NA other downstream 2009174 4007697 ~ 4017817 (-)
G104968 NA other downstream 2526477 3482104 ~ 3500514 (-)
G106538 NA other upstream 492024 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 602189 6639207 ~ 6649971 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location