CI01000018_06057137_06059021



Basic Information


Item Value
gene id CI01000018_06057137_06059021
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6056886 ~ 6059075 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000018_06057137_06059021.mRNA
AAAAACGATGATACATTTTCATAATGGAGACCTCGGTTGCATAAATCTGGTCTCATGGCTAACAGTTTCTTGTCTTTCAAGGAGACAATGTCACGTCCGCGTTCGAGATCTCCTTTATATTCAAGCTTATTGAACCTCTCGAATATCAACAGAATCCCAACCCTTCATGGGAGGAGAGCGGAAGGATTATATGGTGACCAGATACATTCATCGGCGCAATCTGATGTGTGGAGAAACCCTGAATATGTCAACAAGGTAGAAAGTAACACACACTGGAACAAAGATTCCTATCAAGGAGAGCAACATGTCGACCACTGGGCCAAATTTATTGATGCGATAGAGCATGCTCAAAAAAGAGGGCCTTCGCCTATGACCAGATACCACATGCAGGGTGATGAAGAAAGACAGCCCCATTCTCCAAGGAGGCTGCCCAGGGAGAGGTTACCTTCCCCTGATAACATACGTTTTGGTGTTGAAGAGCATTACAGGATGCCGTCGCCAGGCTGGAACAGGAATGAAGGCGTTGAAAAGGAGCTCAATTCACAGCACAATCACAGAGAATCTAGGGACAGGTCTTATCCAAGATATCAAGAAGGAAGAAGACCTATGGATTATGGATATCATAATGAAGAACGTGGCGATCAGTATCATGAAAGAGGCTCCTTTCCAGAGAGGTCATCAAAGTCAGATTATAGGGAGCACCACCCTTCTTCTAAAGGATTTTCAGATTTGGGTCTCCAAGATGAGTTCGTTGAGCATCACAGGGGCTTCAGCCCACGTCGCGCACCTGTCATAGTGGAACACGATCATGGAATCGCAAAACAAGATTCGAGAAACCACGATCCTCTAAAAACGAGTGGCTATCCGAGGAACAGAGATCCACCTAGGCCGACTGAAACCCAGAGGAACCGGGAAGCTCATCGAGATAGAAGAGACCAAGGTCATCATACACGTACCTTACAAGACAGACACCCCGGAAGACCAAATAATAACCCCCGAGAGGAGTCAAGGAAGAACTACTCTTCTTACGGAGGAGAAAGTCAAGCAAGAGAGCGACCAAGACACATGGAGCAATCCAGAATGGAGTCACATTCGAGAGACTCAGACAGACGGCGGGAAATGAATTTGAGGGATGTGAGTGATATTGATTTAAGGAACAGAGAAAGAGGCTCTGTCCACGAATGGGAGGAAGAAAGACCACAAAGGAATCACGGGAGGATGACGGGACAAGAGGAGGTTCGCCAAAGAGCTCCGTATCATAGGAATCGAAACACTAATGTCGGTCCTGCGCCTAGAATGGATTTCAGTGAACAGGAGACCCTCAAGATCAAAGTGGACATGAGTCGCCCCGTCGGGCAAAGCAGGTATAGTATCATTGTCATACCACATTTGGTTAGAGTCAAAAGTTCATGCCTCTTTTCCTGTCCACTGTCGCCAAACCATGAAGACCTGAAGAACGACAATCTACAGATTGTGAAAGACAAGAAGATTCAATGAAAGCGTGGGGTTGCATCAAGAAAACCCACTGACGAGCCACTGATTTTGTGTCTTTCATCATGTACGTGGGTATTGAAGATCACACCAAGATATGGTTACTCCAGGATGGGCAAATTATCGAAAAAGTTTTATAACTTTTGTTCAAGGTTCCCAAGATATCCTGTATGGATCTCCAGAAGAGCTTTAAAAGGGGAAAGATTTGCATGCTTGGATATGTCCACTGAAGTTCAGTGTCATCCCTTGTGAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000018_06057137_06059021.mRNA True 1748 mRNA 0.45 3 6056886 6059075

Neighbor


gene id symbol gene type direction distance location
CI01000018_06052815_06056229 NA coding downstream 532 6052711 ~ 6056354 (-)
CI01000018_06027217_06038423 NA coding downstream 18463 6026991 ~ 6038423 (-)
CI01000018_06021105_06025859 NA coding downstream 31027 6020861 ~ 6025876 (-)
CI01000018_05997348_06004889 NA coding downstream 51997 5997154 ~ 6004889 (-)
CI01000018_05993799_05995338 NA coding downstream 61548 5993741 ~ 5995338 (-)
CI01000018_06066391_06085051 NA coding upstream 7316 6066391 ~ 6085051 (-)
CI01000018_06086167_06089014 EIF1AX coding upstream 26997 6086072 ~ 6089014 (-)
CI01000018_06095005_06111764 RPS6KA3, RPS6KA3A, RPS6KA3B coding upstream 35756 6094831 ~ 6111764 (-)
CI01000018_06132642_06141654 PDHA1, PDHA1A, PDHA1B, PDHA1.L coding upstream 73136 6132211 ~ 6141654 (-)
CI01000018_06353801_06362659 ARMC1 coding upstream 294647 6353722 ~ 6364041 (-)
G106077 NA non-coding downstream 13496 6043160 ~ 6043390 (-)
G106017 NA non-coding downstream 209327 5847345 ~ 5847559 (-)
G106013 NA non-coding downstream 257500 5799157 ~ 5799386 (-)
G105956 NA non-coding downstream 335037 5721518 ~ 5721849 (-)
G105948 NA non-coding downstream 359776 5696758 ~ 5697110 (-)
G106096 NA non-coding upstream 116357 6175432 ~ 6175649 (-)
G106477 NA non-coding upstream 193724 6252799 ~ 6253046 (-)
G106479 NA non-coding upstream 209392 6268467 ~ 6268704 (-)
G106498 NA non-coding upstream 321678 6380753 ~ 6383489 (-)
G106484 NA non-coding upstream 412453 6471528 ~ 6474425 (-)
CI01000018_04856240_04875704 DAP other downstream 1181047 4855081 ~ 4876532 (-)
G105200 NA other downstream 1810876 4243467 ~ 4246010 (-)
G105104 NA other downstream 2039069 4007697 ~ 4017817 (-)
G104968 NA other downstream 2556372 3482104 ~ 3500514 (-)
G106538 NA other upstream 471372 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 581537 6639207 ~ 6649971 (-)

Expression



Co-expression Network