G105307


Basic Information

Item Value
gene id G105307
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4454261 ~ 4454478 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU119696
CTTTAACACATTTAAATCTACACCCACTTCACCTTCATGAAGAGCCACAACACCCTCTCACTTCCCAATGAAGCACATTCACTCACATTTTCTCTTTCATCAGCACTTGATGCAATATCCTCTGTGGCAAGAGTGACACACAGGAAAGTCTAATGGAAGGTTTGGTCACTCATATGAGCTTGGAGCTAAAGATGTCTTTGAAATTTGCCTGATTTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119696 True 218 lncRNA 0.41 1 4454261 4454478

Neighbor

gene id symbol gene type direction distance location
CI01000018_04397198_04411105 BOC coding downstream 43156 4396649 ~ 4411105 (-)
CI01000018_04361150_04364887 ATP6V1A.L, ATP6V1AA, ATP6V1AB, ATP6V1A coding downstream 89374 4360619 ~ 4364887 (-)
CI01000018_04344907_04359005 GRAMD1C coding downstream 95256 4344091 ~ 4359005 (-)
CI01000018_04336914_04342114 NA coding downstream 112147 4336589 ~ 4342114 (-)
CI01000018_04307560_04321214 QTRTD1, QTRT2 coding downstream 131975 4306921 ~ 4322286 (-)
CI01000018_04464837_04473051 NA coding upstream 10160 4464638 ~ 4473051 (-)
CI01000018_04491510_04539751 ATP8A2 coding upstream 36757 4491235 ~ 4539751 (-)
CI01000018_04557779_04561445 RNF6 coding upstream 103158 4557636 ~ 4561997 (-)
CI01000018_04595424_04596449 GPR12 coding upstream 139987 4594465 ~ 4597587 (-)
CI01000018_04604468_04611851 USP12.S, USP46, USP12, USP12.L, RGD1561481, USP12A, USP12-LIKE coding upstream 149309 4603787 ~ 4611851 (-)
G105306 NA non-coding downstream 8894 4444802 ~ 4445367 (-)
G105304 NA non-coding downstream 21779 4432191 ~ 4432482 (-)
G105277 NA non-coding downstream 168269 4285739 ~ 4285992 (-)
G105185 NA non-coding downstream 216126 4234605 ~ 4238135 (-)
G105263 NA non-coding downstream 235352 4218678 ~ 4218909 (-)
G105213 NA non-coding upstream 130150 4584628 ~ 4587775 (-)
G105199 NA non-coding upstream 158219 4612697 ~ 4615380 (-)
G105328 NA non-coding upstream 166873 4621351 ~ 4621628 (-)
G105209 NA non-coding upstream 195403 4649881 ~ 4651347 (-)
G105336 NA non-coding upstream 287183 4741661 ~ 4741921 (-)
G105200 NA other downstream 208251 4243467 ~ 4246010 (-)
G105104 NA other downstream 436444 4007697 ~ 4017817 (-)
G104968 NA other downstream 953747 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 2053358 2389201 ~ 2488018 (-)
G103842 NA other downstream 2494203 1959497 ~ 1960058 (-)
CI01000018_04856240_04875704 DAP other upstream 400603 4855081 ~ 4876532 (-)
CI01000018_06021105_06025859 NA other upstream 1436858 6020861 ~ 6025876 (-)
G106538 NA other upstream 2075969 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 2186134 6639207 ~ 6649971 (-)

Expression


Co-expression Network