G105350


Basic Information

Item Value
gene id G105350
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 4767611 ~ 4768386 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU119739
GGGAAATTCGAGCATGCAGCTGTTCGTCTTTGCGTCATTACATCACGCCTGTTTACATGAAGAAGGAGACCCAGCTAGTAGGCTATATGGCATGTGATTTTGATGGCGGATTGTAATCCAGAAAGGTCCAAATAACAATCATCAGTGACAACTGGAGATTCACCTGTAGTCAAAAGCAAAAGACTTCGGACTGCGGAGTGGCTACAGAAATTGAAATGTACAGGTAACGCTAATACACACTAAATACACATAGTCACGCAATGCTGATGTTGTTAACATTAACAATTTTAGAACAAAGTATAACAATAATAATAATTTGCATGGTTTGACGTGATCCGAGGTAAGCGATCGTTAGATTTAATCACCTTTGGCAGCGCGATTTATTGTAATGCTTTTTTTCTCAGTTGGTCAGAACAAAATTGGCAGACATGATACTTACTTGTTCAGATGACATTTTCCGATGAAAATTCTTATTTTGGTCGTACTTCCAAGACGTAGAATCTGTAATTCAGAAGTAGTATCCACACCGATGTGGTGACTGACAGCAATCATTAGATTCATCTGTGCTGAGGAGCCGTGCCGATGCACAACCCACGTAAAGATGATAATTCCACAAATAACTGCAATTCCAGGTTTCAAACAGAGATGGCGACAAAGAGGCAAATCTTACAGACTGCAGCTTTAAAAACTTTAACATACATTACCATTCAAAAGTTTGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU119739 True 720 lncRNA 0.39 2 4767611 4768386

Neighbor

gene id symbol gene type direction distance location
CI01000018_04738374_04757471 NA coding downstream 10140 4738280 ~ 4757471 (-)
CI01000018_04657706_04674073 NA coding downstream 93538 4657571 ~ 4674073 (-)
CI01000018_04627321_04645724 LNX2A, LNX2 coding downstream 121429 4627169 ~ 4646182 (-)
CI01000018_04604468_04611851 USP12.S, USP46, USP12, USP12.L, RGD1561481, USP12A, USP12-LIKE coding downstream 155760 4603787 ~ 4611851 (-)
CI01000018_04595424_04596449 GPR12 coding downstream 170024 4594465 ~ 4597587 (-)
CI01000018_04773554_04792048 SPATA13 coding upstream 4840 4773226 ~ 4792048 (-)
CI01000018_04798056_04800698 C1QTNF9 coding upstream 29592 4797978 ~ 4800698 (-)
CI01000018_04803745_04804788 TAGLN3B, TAGLN3 coding upstream 34731 4803117 ~ 4804796 (-)
CI01000018_04807843_04810778 ABHD10B, ABHD10 coding upstream 39180 4807566 ~ 4810778 (-)
CI01000018_04811791_04814940 ACOT9.2, ACOT9.1, ACOT9 coding upstream 43252 4811638 ~ 4816478 (-)
G105336 NA non-coding downstream 25690 4741661 ~ 4741921 (-)
G105209 NA non-coding downstream 116264 4649881 ~ 4651347 (-)
G105328 NA non-coding downstream 145983 4621351 ~ 4621628 (-)
G105199 NA non-coding downstream 152231 4612697 ~ 4615380 (-)
G105213 NA non-coding downstream 179836 4584628 ~ 4587775 (-)
G105413 NA non-coding upstream 489926 5258312 ~ 5258511 (-)
G105219 NA non-coding upstream 514320 5282706 ~ 5284386 (-)
G105464 NA non-coding upstream 596664 5365050 ~ 5489735 (-)
G105526 NA non-coding upstream 725450 5493836 ~ 5494106 (-)
G105939 NA non-coding upstream 897467 5665853 ~ 5666088 (-)
G105200 NA other downstream 521601 4243467 ~ 4246010 (-)
G105104 NA other downstream 749794 4007697 ~ 4017817 (-)
G104968 NA other downstream 1267097 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 2366708 2389201 ~ 2488018 (-)
G103842 NA other downstream 2807553 1959497 ~ 1960058 (-)
CI01000018_04856240_04875704 DAP other upstream 86695 4855081 ~ 4876532 (-)
CI01000018_06021105_06025859 NA other upstream 1122950 6020861 ~ 6025876 (-)
G106538 NA other upstream 1762061 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 1872226 6639207 ~ 6649971 (-)

Expression


Co-expression Network