Gene
RNA
| Item | Value |
|---|---|
| gene id | G106017 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 5847345 ~ 5847559 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: lysosomal alpha-glucosidase-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU120515 | True | 215 | lncRNA | 0.31 | 1 | 5847345 | 5847559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_05827740_05839214 | PIGN | coding | downstream | 8131 | 5827576 ~ 5839214 (-) |
| CI01000018_05820608_05821533 | NA | coding | downstream | 25812 | 5819910 ~ 5821533 (-) |
| CI01000018_05803227_05816159 | HNF4G | coding | downstream | 30852 | 5802909 ~ 5816493 (-) |
| CI01000018_05667742_05668807 | NA | coding | downstream | 178105 | 5667619 ~ 5669240 (-) |
| CI01000018_05588289_05597432 | NA | coding | downstream | 249523 | 5587959 ~ 5597822 (-) |
| CI01000018_05864737_05869576 | MCMDC2 | coding | upstream | 16896 | 5864455 ~ 5869576 (-) |
| CI01000018_05870993_05880212 | SGK3 | coding | upstream | 22754 | 5870313 ~ 5880705 (-) |
| CI01000018_05905787_05908656 | NA | coding | upstream | 57966 | 5905525 ~ 5908682 (-) |
| CI01000018_05910381_05911415 | RRS1 | coding | upstream | 62559 | 5910118 ~ 5911415 (-) |
| CI01000018_05969322_05974836 | ARX, ARXA | coding | upstream | 121730 | 5969289 ~ 5975001 (-) |
| G106013 | NA | non-coding | downstream | 47959 | 5799157 ~ 5799386 (-) |
| G105956 | NA | non-coding | downstream | 125496 | 5721518 ~ 5721849 (-) |
| G105948 | NA | non-coding | downstream | 150235 | 5696758 ~ 5697110 (-) |
| G105939 | NA | non-coding | downstream | 181257 | 5665853 ~ 5666088 (-) |
| G105526 | NA | non-coding | downstream | 353239 | 5493836 ~ 5494106 (-) |
| G106077 | NA | non-coding | upstream | 195601 | 6043160 ~ 6043390 (-) |
| G106096 | NA | non-coding | upstream | 327873 | 6175432 ~ 6175649 (-) |
| G106477 | NA | non-coding | upstream | 405240 | 6252799 ~ 6253046 (-) |
| G106479 | NA | non-coding | upstream | 420908 | 6268467 ~ 6268704 (-) |
| G106498 | NA | non-coding | upstream | 533194 | 6380753 ~ 6383489 (-) |
| CI01000018_04856240_04875704 | DAP | other | downstream | 971506 | 4855081 ~ 4876532 (-) |
| G105200 | NA | other | downstream | 1601335 | 4243467 ~ 4246010 (-) |
| G105104 | NA | other | downstream | 1829528 | 4007697 ~ 4017817 (-) |
| G104968 | NA | other | downstream | 2346831 | 3482104 ~ 3500514 (-) |
| CI01000018_02389202_02488018 | CNTNAP2, CNTNAP2A | other | downstream | 3446442 | 2389201 ~ 2488018 (-) |
| CI01000018_06021105_06025859 | NA | other | upstream | 43777 | 6020861 ~ 6025876 (-) |
| G106538 | NA | other | upstream | 682888 | 6530447 ~ 6533512 (-) |
| CI01000018_06639339_06649926 | NA | other | upstream | 793053 | 6639207 ~ 6649971 (-) |
