G107349


Basic Information

Item Value
gene id G107349
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000019
NCBI id null
chromosome length 5832599
location 1616383 ~ 1616721 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU122031
AAAACACTGGGTTGTTTCAATCCAAATTTGGGTAAAAAAAAAAAAATGGACAAACCCAACCATTGGGTTAAATTAATTATTTTGACCCAGTGCTTGGGTTTGTCCATATTTTACCCAAATATGAGTTGAAACAACCCAGCATTTTTAAGAGTGTGTAATGAAACTTGATGGGGACCTTGACTATTTCAGAAAAAAAAAAAAGAAGAAGAAGAAAAAAAAAAAGCTGGCTCAAAAATAGTCCATACAGCTGTTCTATGTCACAAATGATTAAATATTACATTAGAATTTGTTTGAAATTGAATGGGGACAGTCTGTCAAGCTCTTTGTGTGGGGGAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU122031 True 339 lncRNA 0.33 1 1616383 1616721

Neighbor

gene id symbol gene type direction distance location
CI01000019_01551505_01559104 PFKFB3 coding upstream 56794 1551505 ~ 1559589 (+)
CI01000019_01471655_01474704 NA coding upstream 141288 1471527 ~ 1475095 (+)
CI01000019_01412887_01414107 NA coding upstream 201960 1412756 ~ 1414423 (+)
CI01000019_01358330_01362294 TMCC3 coding upstream 252480 1358330 ~ 1363903 (+)
CI01000019_01320371_01322904 NDUFA12 coding upstream 293392 1320371 ~ 1322991 (+)
CI01000019_01679656_01690297 TMEM110L coding downstream 62527 1679248 ~ 1690297 (+)
CI01000019_01715895_01733784 ITIH2 coding downstream 98529 1715250 ~ 1734142 (+)
CI01000019_01740386_01743210 ATP5C1, ATP5C1.L, MGC82276 coding downstream 123627 1740348 ~ 1744864 (+)
CI01000019_01747943_01748454 NA coding downstream 129827 1746548 ~ 1748474 (+)
CI01000019_01827498_01836683 GATA3 coding downstream 210500 1827221 ~ 1837763 (+)
G107342 NA non-coding upstream 4783 1610557 ~ 1611600 (+)
G107328 NA non-coding upstream 31235 1584763 ~ 1585148 (+)
G107327 NA non-coding upstream 32083 1583998 ~ 1584300 (+)
G107307 NA non-coding upstream 35456 1578120 ~ 1580927 (+)
G107298 NA non-coding upstream 66816 1549353 ~ 1549567 (+)
G107308 NA non-coding downstream 27486 1644207 ~ 1661228 (+)
G107418 NA non-coding downstream 272658 1889379 ~ 1941823 (+)
G107422 NA non-coding downstream 277350 1894071 ~ 1896735 (+)
G107454 NA non-coding downstream 328122 1944843 ~ 1945311 (+)
G107980 NA non-coding downstream 368633 1985354 ~ 1986015 (+)
G107312 NA other downstream 12711 1629432 ~ 1629985 (+)
G107310 NA other downstream 84024 1700745 ~ 1706990 (+)
G108050 NA other downstream 724278 2340999 ~ 2341333 (+)
G108563 NA other downstream 1551627 3168348 ~ 3169195 (+)
G108454 NA other downstream 1595730 3212451 ~ 3234285 (+)

Expression


Co-expression Network