XLOC_008263 (CABZ01040556.1)


Basic Information

Item Value
gene id XLOC_008263
gene name CABZ01040556.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 3674765 ~ 3689119 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00016636
AGGTCAGAGGCGTCATCGTCGCTACGTCATGTAAATACGGAAGTGATACTGTCGCGTCGCGTCTCTACCTGAAATTTTATGGCAACAGTGCAGTCATAagcaaaaacataatttattcagTTTAAAGCTACTCAACAATTACAGATAAAAGACTTGCAATTCAGTTGTAAGTTCCTGTAAATAATAGCGCTATATTGTTATGTATTTCTGCTCCTCTACGTTGAGTAATAGGAGCATTATCCCGTGTCGGAAGTTGATATCATGGATCAATATTCAGTGGTGAGAGTTATTGGTGAAGGATCTTTCGGTCGAGCTCTGTTGGTTCAGCCGATACATGAGGAGAAACACTATGTTATGAAGGAAATACGACTGCCAAAGgcaGAGTCTGGGATGAAGAAGAGCAGAAGTGAAGCTGTTCTTCTGTCCAAAATGAAGCATCCCAACATCGTGGCCTTCAGAGACTCGTTTGAAGCTGACGGTCATCTGTACATCGTGATGGAGTTCTGCAGTGGTGGAGATCTAATGCAAAGGATACGACAGCAGAACCGACTGCTGTTCTCTGAGGAACAGATCCTTAAGTGGTTCGCACAGATGTGTCTAGGCACCAAACACATTCACGACAAGCGAGTACTGCACAGGGATTTAAAGTCAAAAAACATTTTCTTGACAGACAGTGGAACAGTGAAGGTGGGGGATTTCGGCTCTGCTTGCTCTCTCAACAGTGCAAAAGCATACGCTCAGACATATGTGGGCACCCCGTATTATGTTTCTCCAGAGATATGGGATAACAAACCTTACAACAATAAAAGTGACGTCTGGTCGCTGGGCTGTGTTTTGTATGAACTTTGCACCCTCCAACACCCGTTTCAGGCACGGAGCTGGAAGAGTCTGATCCTGCAGGTCTGTCGAGGGTCATACGCTCCTTTACCAAGTCATTTCCCTTATGAGCTGCACTACCTCATCAAACACATGTTCAAGACCAACCCTAAAGACAGACCCTCTATCCACACCATCCTGAGCTCCCACCGCGTGTCCCGACTGCTGCACAAACACCTTACACTTGAGAATCAGGAACTGCTTCAAGAACGAACACGGCACTGGAGGAGAGAGGAAGGAGAGAAAGTGGCCGTGTTTTTAGGACAGAAGAGCTTACTGAACTCCTCCTCTGCTGAAGGAGCATTTCATGCAGGACAGTCCCTCTGTGAAAACAGCAGCAGTGATGATCCAGCATCCCGTAAGAAGTGGGCAGTCGGAGCATGTAACACTGTGCTGGGGGTCCTAGAAAATGCTGACATCATTTCCACTGGAAGCACGGCAACTGCAGAGCGGCCTGACCTCATCTCTGAGTGTGTGGAGACGCAGGAAAGACGAGTGAGGAAACAGTGGGACAGAGATCCACCACAGAGACTACTGAGTGTCCTGGAGAAAGCACAGCTCAGCTTTGGCTTTGAAACATACACGATACACAGAGACGGTCAGTCTGAACACACACTTCTTGACATTAATAACTGTAGCTATTATGCAATTATCCATAATGATTATGCAAAACAAAGGGCGTGATCGTACACACCAACACGCAAAATGCCAGGCTTAAAGGGGTCcttttatgcccctttttacaagatctaaaataagtctctgatgtccctagagtgtgtatgtgaagtttcagtagATAATACCTcacatataatgttttataactctttgaaactgccccttttaggttttgatctaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000058869

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00016636 True 1739 mRNA 0.45 11 3674765 3689119

Neighbor

gene id symbol gene type direction distance location
XLOC_008261 LHFPL6 coding upstream 22614 3539044 ~ 3652151 (+)
XLOC_008262 NA coding upstream 79506 3593339 ~ 3595259 (+)
XLOC_008260 NA coding upstream 144984 3527405 ~ 3529781 (+)
XLOC_008259 FO704837.1 coding upstream 168342 3506309 ~ 3506423 (+)
XLOC_008258 NA coding upstream 291651 3382814 ~ 3383114 (+)
XLOC_008265 RNF14 coding downstream 76982 3766101 ~ 3804420 (+)
XLOC_008266 CABZ01061592.1 coding downstream 119877 3808996 ~ 3816757 (+)
XLOC_008267 CABZ01061591.1 coding downstream 135998 3825117 ~ 3925989 (+)
XLOC_008268 NA coding downstream 260761 3949880 ~ 3954691 (+)
XLOC_008269 NA coding downstream 623972 4313091 ~ 4321015 (+)
XLOC_008463 BX663520.1 misc downstream 17563072 21252191 ~ 21252282 (+)
XLOC_008255 NA non-coding upstream 434808 3237595 ~ 3239957 (+)
XLOC_008270 NA non-coding downstream 839430 4528549 ~ 4531965 (+)
XLOC_008271 NA non-coding downstream 864777 4553896 ~ 4554428 (+)
XLOC_008278 NA non-coding downstream 1567382 5256501 ~ 5256782 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000092_00779993_00785442 NA coding CI01000092 null 779932 ~ 785442 (+)