XLOC_008270


Basic Information

Item Value
gene id XLOC_008270
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 4528549 ~ 4531965 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018754
TGCGGGTTAATCAGATGTAGAGTAAAAAAGTGATTCAAGGCTTTATGGTGATTTTAATTAGTGTATGCAGACAAAAGGACACAATGGGAGGTTGTGCGGTGCTGCGCTGTTTTGGCGTGGTGCGACTTTGCTGCGCCATCTGGCTGGCCCATTATTCATGCTGAAGAGGATTTCCTGTGAAGACGATGGTGACGGTGGTTTTCACAGGGTGTGGGTCTGTGACGCAGCTCGCCGAATTTGCGAACAAATGAACTCGCAGCAGCAAATTCTGCCAGTGTCTTCATGTGACAGGTCAGTTTGAGACTTACGCACATGATCTGGTTTATATTCACTTAAatgattaatttgttattattaatttaattaatttaccaTGTGTAAAGCCGATTTGACAGCATAATTActgtgaaaagcactatataaataagaTTGAGTTGAAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018754 True 440 lncRNA 0.41 2 4528549 4531965

Neighbor

gene id symbol gene type direction distance location
XLOC_008269 NA coding upstream 207534 4313091 ~ 4321015 (+)
XLOC_008268 NA coding upstream 573858 3949880 ~ 3954691 (+)
XLOC_008267 CABZ01061591.1 coding upstream 602560 3825117 ~ 3925989 (+)
XLOC_008266 CABZ01061592.1 coding upstream 711792 3808996 ~ 3816757 (+)
XLOC_008265 RNF14 coding upstream 724129 3766101 ~ 3804420 (+)
XLOC_008271 NA coding downstream 21931 4553896 ~ 4554428 (+)
XLOC_008272 si:dkey-35i13.1 coding downstream 100817 4632782 ~ 4635819 (+)
XLOC_008273 rnf169 coding downstream 437163 4969128 ~ 4985077 (+)
XLOC_008274 spcs2 coding downstream 456224 4988189 ~ 4999810 (+)
XLOC_008275 abcg1 coding downstream 496643 5028608 ~ 5074983 (+)
XLOC_008463 BX663520.1 misc downstream 16720226 21252191 ~ 21252282 (+)
XLOC_008264 NA non-coding upstream 810166 3682312 ~ 3718383 (+)
XLOC_008262 NA non-coding upstream 933290 3593339 ~ 3595259 (+)
XLOC_008260 NA non-coding upstream 998768 3527405 ~ 3529781 (+)
XLOC_008278 NA non-coding downstream 724536 5256501 ~ 5256782 (+)
XLOC_008289 NA non-coding downstream 936133 5468098 ~ 5471508 (+)
XLOC_008291 NA non-coding downstream 1309592 5841557 ~ 5853342 (+)
XLOC_008292 BX088654.1 non-coding downstream 1323146 5855111 ~ 5855225 (+)

Expression


Co-expression Network