CI01000024_00931895_00936667


Basic Information

Item Value
gene id CI01000024_00931895_00936667
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 931742 ~ 936831 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_00931895_00936667.mRNA
AGAGAGAAATATGAAAATAGAGGTATGGATGAGAAAGAGCGAAGAAAATGTTCACCATTGCTTCAACATATAGCATGGTATGCCACCCTAACTTATAATTTTTAGTCTCTACAAGCCAAATAGTTCCTCTGTGATTCTATGAGGTCCAGATTAATGATGCCCCCATGGAGATGTTTCTGAAGGACAGTATGTGTGAGGGAACGTCTGATCGCCCCTGCACCCTCACCATGGGACCAGGTTCAACGGATCTACAGGCCCGCAGGGTGGACCAGACAGCCACAGCGTTCCCACTCTGTATCCAGGCTAATTTCATAAAAGACGGAGAATATTCCCACAGAAAGCACGGTTACCCCCTAGTAGAGTGTCAGTCCACTGTGTTCTCTTCCCCAGCCAGCTGGCAGCTCGTCAGGGGCAGGGCGGCTCTCCGCTCCCTGCTCTCGTCACTCGGCAGTGGGGAGGACAGGCTGACTGGCTGGCATATGCTGGATTCGACCTCCACATGCCACTGTGGTGCTCTCCGTCTCTCAGCCCGGCTCAGTGTCCATCAGTCGTCGCAGAGATCACACAATTTACCTCCGCTAGCAGATTATCGCCCCACGCTTTGCGCTGTTTGCACAGCATACCCACCATGTAAAAGCCAGTTTCGGCATGGTCACGGTAGACCTTTCATCTGCATGACTGGCAGCCGTATTCCACCACAGTTGGGCCTGAGTGAGATATCCAGGTCTAGCCAGGAGAGACTTTTCCTAAATGAAGCCCACAGTGGGGGGGATCCCTCGCAGGTGTCTCCCTGGTTAGTGGAAGGCCTGTTTGGCGATGCCGAATGCCCCAAGCACTGCCAGGCTATTTACATCCTCTGTGCATGTCCAATCAGACTGGGCTTCCAGGGAAACACGTTTTGCATCCAGCCTGGTGCTCAAACACAGAACACTGATCTAAGAACCCATGCTGTTGCTCCACCACTGCAGGACCCTACTGATCCAGAAGAGGAAGGAGAGAAAGAGAGAGAGAGGTGGATTGAGCCTCAGCCTTGTCAGGATGGATTAAAGGAAAGTCTTTGAGGGTTTTTCAGAAATGCTGAAACTGAGCTTCCTGCTCTCCGCAGTTCTTTCACTCCTGGCTCTCGCTTTTATCCTTCATTTTATCTCAAGCCGTTCATTAATAGTCCCTGAAATTAACGAGCACGTCATACATCCGTGAACACCTTCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_00931895_00936667.mRNA True 1214 mRNA 0.51 4 931742 936831

Neighbor

gene id symbol gene type direction distance location
CI01000024_00913269_00915063 POU3F3, POU3F3A, POU3F3B coding downstream 16177 912852 ~ 915565 (-)
CI01000024_00871953_00893156 MRPS9 coding downstream 38586 871689 ~ 893156 (-)
CI01000024_00825386_00837898 NA coding downstream 93192 824968 ~ 838550 (-)
CI01000024_00766380_00783144 NCK2B, NCK2 coding downstream 147486 765081 ~ 784256 (-)
CI01000024_00758857_00762162 NA coding downstream 167963 758598 ~ 763779 (-)
CI01000024_00955186_00965837 NA coding upstream 17886 954717 ~ 966070 (-)
CI01000024_01258292_01261764 NA coding upstream 320448 1257279 ~ 1262033 (-)
CI01000024_01405425_01412752 PTPRNB, PTPRN coding upstream 468244 1405075 ~ 1412752 (-)
CI01000024_01423879_01438170 DNPEP coding upstream 486860 1423691 ~ 1438170 (-)
CI01000024_01455583_01465466 TMEM198, TMEM198B coding upstream 518564 1455395 ~ 1465577 (-)
G121423 NA non-coding downstream 25798 874427 ~ 905944 (-)
G121415 NA non-coding downstream 83280 845994 ~ 848462 (-)
G121412 NA non-coding downstream 89723 838695 ~ 842019 (-)
G121399 NA non-coding downstream 273995 657431 ~ 657747 (-)
G121398 NA non-coding downstream 275132 656400 ~ 656610 (-)
G122859 NA non-coding upstream 444597 1381428 ~ 1385325 (-)
G122860 NA non-coding upstream 507755 1444586 ~ 1452856 (-)
G122923 NA non-coding upstream 555020 1491851 ~ 1492211 (-)
G122926 NA non-coding upstream 564744 1501575 ~ 1505218 (-)
G122981 NA non-coding upstream 676005 1612836 ~ 1613067 (-)
G123233 NA other upstream 1610629 2547460 ~ 2555036 (-)
CI01000024_03938368_03941795 NA other upstream 2999211 3938315 ~ 3941924 (-)
G125457 NA other upstream 6420406 7357237 ~ 7358104 (-)
G125798 NA other upstream 7038836 7975667 ~ 7976047 (-)

Expression


Co-expression Network