CI01000024_02597194_02605289


Basic Information

Item Value
gene id CI01000024_02597194_02605289
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 2596751 ~ 2605289 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_02597194_02605289.mRNA
TTTTTTGTGGTGGTCCTCTCAGAGAACAACACTGGAGGTACGGCACAAAAGAATCCCCATGAACTGGACTTCTCTCGGCACAATATTTTGACCGCCCAGTTTGAATGTTACCAGAAGATTATGAAAGACACAAATCACAACAAAACAGATAGTTCTAAGTGTAAACGGACCTGGGATGGATGGCTGTGCTGGGAGCATTTGGATGCAGGATTCACTTCAGCCCAGCACTGTCCAAACTACTATACTGACTTTGACACCTCAGAACATGGACAAATTACACGGGCTGTCAGCACAAGTCTAATGATCACAAAAGGGAGCTTAAGTTGCCAAAGGGTAACTCTACACAAGAATCTCTTCTTCTCCTTTGTGCTGAATTCGGTTATAACCATCATCTTTTTCACTTGTGTTGCAAACAACCAAGAAGTAACCCAAGCTAACCCAGTGAGCTGTAAAGTGTCCGTGTTCATCCACCATTATCTCCTGGGCTGTAACTACTTCTGGATGTTGTGTGAAGGGATCTATCTGCACACCCTTATTGTGGTGGCAGTGTTTGCTGAGAAACAGCAACTCATGTGGTATTACCTTCTAGGATGGGGCTTCCCGTTAATACCTGCATTTATACATGCAATATCCAGAAGTTATTACTACAATGACAACTGTTGGATAAGCTCGAACACTTCTCTGCTCTACATTATTCATGGGCCCATCTGTGCAGCCCTGTTGGTTAACCTCTTCTTCCTTTTAAACATTGTGAGAGTGTTGATCACAAAGCTGAAGGTGACCCACCAGGCTGAATCCAGTCTGTACATGAGGGCCGTCAGGGCCACCTTAATCCTGGTACCTCTGCTGGGCATTCAGTATTTACTGCTGCCCTACAAACCCGATGGACGGCTTGCCTTCGAGATATTTATGCACATAATGAACATACTTTTGCATTACCAGGGCCTTTTGGTTGCCACTATATTTTGCTTTTTCAATAGCGAGGTGCAAGGTGTGTTGCGAAGGCACTGGAACCAGTACCGCATCCAGTTTGGCAGCACATTTACGAACACGGACGCCCTGCGTTCCGCATCCTTCACGGCCTCCTCCATGACAGAAGTCCATCGATGTTACAGCATTGACAGCCACATGGAGACTCTAAATGGCAAGAGTTTTCACAATCTGGAGAACACCATTCTCCGATCAGACAACCTGTACATATGAGAAACTCTTTGACTTCTGGGATAACAGCCTCATGGAGAGCACCACTGACTGAGATGTGTCCTTACAGGACATACATCTGGACAATTTGGACTGTAGACCCCAGGAAGCCTTTCATTTTCCCTACAGGCTTCAGTGACCTTCAGTTTATGGATGGGAACTGGAGAAAATACTGTATTTTATTTGGAATATTAAAGTCACGTGAACATTTTCCACAGTGATCCAGTGAAACACTATGGAGAACATCACACATTGACAGTCTTTCTGATTTCTTTGATTGAAATGGAGGTGGACTGAAAAACATAACTTAATATAGCTTTATTCTTCATGGCACTGCGTTTAATTGAAGATTGAGCCACCCTGATGCATTGGATGATGGTTGTCACATCTATGGATCTATGGATTATTCTAGCTCAAAGAATCTGTAGTAAAAAAAAAGGAATAAA

Function

NR:

description
Calcitonin receptor-like a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_02597194_02605289.mRNA True 1646 mRNA 0.44 10 2596751 2605289

Neighbor

gene id symbol gene type direction distance location
CI01000024_02555602_02562403 ZSWIM2 coding downstream 33819 2555283 ~ 2562932 (-)
CI01000024_02484606_02498687 NA coding downstream 97565 2475874 ~ 2503657 (-)
CI01000024_02421600_02456292 BAZ2B coding downstream 140459 2421600 ~ 2456292 (-)
CI01000024_02402657_02417463 WDSUB1 coding downstream 178690 2402413 ~ 2418061 (-)
CI01000024_02249593_02250941 NA coding downstream 345657 2249593 ~ 2251094 (-)
CI01000024_02659912_02681156 NA coding upstream 54371 2659660 ~ 2684099 (-)
CI01000024_02712596_02739960 COL5A2, COL5A2B coding upstream 106584 2711873 ~ 2739960 (-)
CI01000024_02761265_02771248 NA coding upstream 155563 2760852 ~ 2771248 (-)
CI01000024_02771915_02777060 NA coding upstream 166517 2771806 ~ 2777060 (-)
CI01000024_02829108_02838763 ATG9A coding upstream 223357 2828646 ~ 2839196 (-)
G123247 NA non-coding downstream 16244 2580165 ~ 2580507 (-)
G123235 NA non-coding downstream 39967 2556554 ~ 2556784 (-)
G123225 NA non-coding downstream 54648 2539014 ~ 2542103 (-)
G123229 NA non-coding downstream 58667 2535337 ~ 2538084 (-)
G123232 NA non-coding downstream 66445 2530051 ~ 2530306 (-)
G123256 NA non-coding upstream 19306 2624595 ~ 2624835 (-)
G123324 NA non-coding upstream 173169 2778458 ~ 2779425 (-)
G123322 NA non-coding upstream 176741 2782030 ~ 2782980 (-)
G123334 NA non-coding upstream 178382 2783671 ~ 2783972 (-)
G123233 NA other downstream 41715 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 1769900 824968 ~ 838550 (-)
CI01000024_03938368_03941795 NA other upstream 1330753 3938315 ~ 3941924 (-)
G125457 NA other upstream 4751948 7357237 ~ 7358104 (-)
G125798 NA other upstream 5370378 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031895 calcrlb coding NC_007117.7 CM002890.2 11680726 ~ 11704680 (+)