CI01000024_02761265_02771248


Basic Information

Item Value
gene id CI01000024_02761265_02771248
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 2760852 ~ 2771248 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_02761265_02771248.mRNA
AGGCCGCATCCTTCGAAGGCTCTGTAGCGCCGTAACTGGCGGTGTGAGTGGAGAGTGGAGAGTGGGAGGGCCTAGCCGTGTGTACTCTGCTGATGGTGTGACAGAATATCCAGAGGTCAAAAGAGCAAGACATGATGTGATCATCAGGGTTGTCAAGAAGACTTTTGCAGGAATTGCTGGGCTGTTCCGTTCGAGACACCGCAGGAAGGCAGAACATGAAAAGCAGAAAGCCTTTACGCAGGTTGGCAGGGTTGCCTTTATGGGTATTGATGACATATACAGCAACAGCCTGAGTTCATGGACTGAGAGTGACGGAATGGTCTCTGCATTTATCTTCTTTAGCAGTGGAGCAATGCTGTACAAGGGAAGCCAGGACAGAGGCAGGGAGATGCGCCGATCCCTAAAACTAGTGCCGTCTTGCACCACCCACGGGCTGAGCACAAGACCGGCTGAGATGGAGCACCCGAGCCGCACACACAAACCTTGCCTGACCGTGGAGGAGGCATTGAGAGAGAGTGATCGGGAGCATTACAGGAAGCTAGTAGAGATGGCGTCTGAGAAATACTCAAAAAGCAAACCATTGCCGTTTGGACGGATGAAGCCTCCAATCACAAATTTCTCCCTTGATGGGCATAAGGCCAATGGACATACCTCCCTCAATCGCACTACTGACATGAGCAGACCTGCTCCAGTAAGAGCCATCCCTAACATGTCTGTCTGGCGGGATCCAGTATCACTGATGCAGACTAAAGACAGAAAAATAGATGTTAATCACAGCACACCAGGAAATGATGTCAAGCAAGGAGCCTTGGATAATCAAACTGCAAGAAAAATCCCTGTAGATGTGGATCTGTCAGCTGAGGTTGAAGCCAGGCTGAATCTCAAGGAGAAAGACACAGCTGCAGGACCCTTGCTACCATCCAGATCTGAACTGATTACAGATACAGTAAGGCGCAGTGAGGAGGAGTTTCCCAGACTGACCAAGGAGATGCAGCAGGAAGTGAGTGCTGCTCTTGCTCAAAGTGATCCAAACCTGGTTCTGTGCAGTGCTTTCAAACTGCGTATCACACAGAGGGATCTGGCAACCCTGCAAGAAGGAAGCTGGCTCAATGATGAGGTGATCAACTTCTACATGAATCTCGTGATGTCCCGTAGTGAGCAGGAAGTAGGAGGCAGAAGGGTCTATTCTTTCAGTACCTTCCTCTTTCCCAAGTTGCATGGTGGTGGACATGCTTCAGTACGGCGCTGGACTAAGGCTGTAGACCTCTTCCTGTATGACATCATTCTGGTCCCCCTTCACCTGGGTGTTCACTGGTCCCTTGCTGTTGTTGACTTCAAATCAAAGTCTGTACTATCATACGACTCCATGGGTCAACGGCATGATGACATCTGCAACATGATTCTGCTTTATCTGAAAGAGGAGTTCAAGGTGAAGAAGGGAAAAGATTTGGACATGTCAAAGTGGACCTTGAGCAGTTTACGTCCTTCTGAGATCCCGCAGCAGAAGAATGGTAGTGATTGTGGTGTGTTCGTATGCAAATATGCTGATTATATCTCCAGAGGACGCAATCTCACATTCAGACAGTCCTGGCCTCCAAGTGCCTTGATCCGAGTGCATCTCATATTTGAAAGCCGTAAAATAGAAATGTGGAGTATTATGGCTTCGCACCTGACATGCTTGTTTTATAGTTTTCTGTGTGTAAGGAAGCAACAGAGCTTAACACAAGTAAAAACCAGAGCTGGATGATGGGGAGGGGAATGCATTGGTCTCATTTTTCTGATTCTAAATGCTATATTCATAATCCCAATGGCTGTATTAGACATTCTTATTGAACTGGAAATGTGGAGCAGTGAAGTTGTGCCAAACGGACATTTCAGTGGTTAAGTTCTGCAATATTCCTCTCTCATCCAGTAATACAGGATCAAAAAGTGCTTTAAGAAAAAGGTCTATATTTATTTGTTCGTATGTGGCTCTTCTGTTTAGGTTGAGCTTGAGTGCATATCCTGAAGTGGAATTGTTTGTGAGAATGGAGAGTGTTTCGATTGGCAGAGGGTGAGTTCTGATGTGAGCTTTAATATAGAAAATGAAAAGGCCCACTGCAAATGAACCGTTTTTGTCATTAATGCAGAATGTTGGTCATTATTTTTGTAAGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_02761265_02771248.mRNA True 2160 mRNA 0.46 16 2760852 2771248

Neighbor

gene id symbol gene type direction distance location
CI01000024_02712596_02739960 COL5A2, COL5A2B coding downstream 20892 2711873 ~ 2739960 (-)
CI01000024_02659912_02681156 NA coding downstream 76753 2659660 ~ 2684099 (-)
CI01000024_02597194_02605289 NA coding downstream 155563 2596751 ~ 2605289 (-)
CI01000024_02555602_02562403 ZSWIM2 coding downstream 197920 2555283 ~ 2562932 (-)
CI01000024_02484606_02498687 NA coding downstream 261666 2475874 ~ 2503657 (-)
CI01000024_02771915_02777060 NA coding upstream 558 2771806 ~ 2777060 (-)
CI01000024_02829108_02838763 ATG9A coding upstream 57398 2828646 ~ 2839196 (-)
CI01000024_02849288_02866286 NA coding upstream 77852 2849100 ~ 2866404 (-)
CI01000024_02939122_02964449 ABCC6A coding upstream 167135 2938383 ~ 2964449 (-)
CI01000024_03048421_03049271 NA coding upstream 276916 3048164 ~ 3049529 (-)
G123256 NA non-coding downstream 136017 2624595 ~ 2624835 (-)
G123247 NA non-coding downstream 180345 2580165 ~ 2580507 (-)
G123235 NA non-coding downstream 204068 2556554 ~ 2556784 (-)
G123225 NA non-coding downstream 218749 2539014 ~ 2542103 (-)
G123324 NA non-coding upstream 7210 2778458 ~ 2779425 (-)
G123322 NA non-coding upstream 10782 2782030 ~ 2782980 (-)
G123334 NA non-coding upstream 12423 2783671 ~ 2783972 (-)
G123338 NA non-coding upstream 16766 2788014 ~ 2788239 (-)
G123339 NA non-coding upstream 17668 2788916 ~ 2789147 (-)
G123233 NA other downstream 205816 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 1934001 824968 ~ 838550 (-)
CI01000024_03938368_03941795 NA other upstream 1164794 3938315 ~ 3941924 (-)
G125457 NA other upstream 4585989 7357237 ~ 7358104 (-)
G125798 NA other upstream 5204419 7975667 ~ 7976047 (-)

Expression


Co-expression Network