CI01000024_06889558_06901776 (MTIF2)


Basic Information

Item Value
gene id CI01000024_06889558_06901776
gene name MTIF2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 6889447 ~ 6902501 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_06889558_06901776.mRNA
AGAAATGACATATGACTTCAGATATTATTTGCTTTTAAAAGCTGATTTTTTCTTCGCGTCTCTGCTTTTAAAGTCTGTATACTGAATGAATTCAGCGGTGAGTGTATTTTCTCTTGTTTACTAAGTATGTTTTTCACATGCAGGAAAGTAATCATGCTGGTAATCTGTCTTGAGCTACTGTAATATGTCAGCTTTATAGATGTGTGTAAAGATACAAAATGTGCCTTGGTATTACTATGTTTTGGTGTGTTATGGTGATGACATTTTGCACGGTAATACTATTTTATTTGAACATATACTGTGGTATATGTCTTTTGCCATGTACCATGGTAATACCATGGTGTTCTTTGAATTGGCTCGATTACCATGTACAGTAAATACAATGGCAAATGAATATAGTAATCATGCATACCATTGCATTTATCAAACTACCATGGTATTATAGCATTAGTGTATCTTTTTATCAAAGTACAAAGGGAGTAATCAACTTTAGTACTAGATTCATTTGTGTTTGTTATCATATCATTTGCATTAAACAAGTTATTTAAATAATACTGCTATTCATGATACATCTCTTTTATAATTTTAAAAGCGTTTTGTCTTCTAAGATGTAATGCAATAGTATATCTGTAGTCATTGTACTGACCTTGTCCTGGATTAATGATATAATTTAATATTCATTGTCCATATATGAACTGTTAAGCTTTTTTATTAGAAAATCTGCAATGAAGCGGATAGCAGCCTTGATTGGCAGAACTGGGTTGTCCTGTTGGCATCATGGGAGCCCACGTCTTCCCCCTCTACCTGCCTGGGCCCCTGGACCTCCGTCCATCTGTCTTCAGGTCCGACACCTGGCTGCAAAACAGAATAAGGGTCATTTCAAAGGTGAGAAGTTCAAATCGAAACCAGTGAAACTAGAGAAACAACAGAAGCAGGAGGTGGAGATCAAACAGAGGATGACTGTGTCTGAACTCGCCAACGCCATGAATAAAGACATTGATCACGTCTGTGAGGCCCTGCTCAACACAGATGTCGATCTGGATGAGTTGGAGCCTGACACAGTGCTGGAGGAGAAATGGATAAAAGAGGCAGTAAAGAGATCAGGAATGAAACACAAATGGGCCAAACTGGTGGAAACCAAAGTCAGAGAAAACAAAGATATCCAGAGACAACCTCCCCCAGATCCCGCTCAGTTAGTCCCTCGAGCTCCAGTGGTGACCATCATGGGTCATGTAGACCATGGAAAGACCACCCTGCTGGACAGTCTAAGGAAGAGTCAGATCGCTGCTCAGGAGGCGGGGGGCATCACACAACACATCGGAGCATTCCGGGTTCAGCTGCCCTCAGGTGAAAAGATCACTTTTCTGGACACACCTGGCCATGCAGCGTTCTCTGCTATGCGGGCGCGTGGAGCCATGGTCACTGATATCGTCATCCTTGTGGTTGCAGCTGATGACGGTGTGATGAAACAGACAATTGAGTCCATACAGCATGCCAAAAAAGCCAAAGTGCCGATTGTTGTCGCTGTGAATAAATGTGATAAACCTCAGGCTGACCCCCACCGTGTGAAAGAGGAGCTTGTAGGCCATGATGTAGTCTGTGAGGAGTTTGGTGGGGAAATACAGGCCATCCATGGGGACAATTTATTAGAGCTGGCCGAAGCCACGGTGGCACTGGCAGAGGTCCTGGAGCTGAAGGGTGACCCCACAGGCCTGGTAGAAGGGACGGTCATAGAGAGCCGGACAGACAAAGGCAAAGGGCCTGTTACCACGGCCATCATCCAGCGTGGCACTCTGAGGAAGGGCTGCACGCTGGTGGCAGGAAAGTGCTGGGCTAAAGTGCGCTTCATGTTTGATGAGCACGATCAGGCTGTGAGTGAGGCCGGGCCCAGCATCGCTGTGGAGATCGTGGGTTGGAAAGATCTTCCCTCTGCTGGTGAGGAGATCCTGGAGGTGGAATCAGAGCAAAGGGCCCGTGAGGTGGTGGAGTGGCGCAGCTACATGGAAGAGCAGGACAAGCTGAAAGAAGACCAGCAGGCCATCGAAGCCAAGCAGAAGCAGCATCAGGACAGCTACAAGAAAGAGCGGGAGAGCACGGCCCATCTCTCCTGGAGACAGAGGAGGGCGGCCATGTACCGGGCCAACAAACACAAACTCATCCACAGGACCAGTGAGAAAACTGAGATGGAGGAACTTACGCTGCCCGTGATCATCAAAGGTGATGTTGACGGCTCAGTAGAGGCTATTTTGAACATCCTGGAAAGTTACGATGCTGATGACCAGTGTCAGTTGGATGTGGTACATTTTGGTGTGGGCGACATCTCAGAAAGAGACATTAACTTGGCAGAGACGTTCTCAGGCATCATATATGGGTTCAATGTTGAAGCAAATAAATCGATTCAGCAGATGGCTGCTAAGAAGGACATTCCCTTAAGATTACACAGAGTCATCTACAAACTCATAGATGAACTCAAAGACGACTTGAGCAGCAAACTGTCCCCAACCACAGAAGAAAATATAATTGGTGAGGCCTCAGTTCTGGCCACATTTGATGTGACAGTCGGGAAAAAGAAGATCCCAGTGGCTGGTTGTAGAGTTCAGAAGGGCCTACTGGACAAAAAGCTGAAATATAGACTTATTCGAGGGAGAGACATTCTCTGGGAAGGATCCTTGACAACACTGAAACATCTGAAGGATGATGTTCAGACCGTAAAGACAGGCATGGAATGTGGTCTTTCTTTAGATAATGAGGAACTACAGTACAAACCCGGGGATGAAATTGTTTGTTACAGTGAATCTGAGATCAAACAGAAAATATCTTGGGATCCAGGATTTTAAAGGACTGCGATTGACGCATCAGTATACTATGCTATGTAGTATACATGCGTATGCAAAAGCTGTAACAAAATTTGCTATAGCAATCCTACACTATCACCAAAAGATAATAAA

Function

symbol description
mtif2 Predicted to enable GTP binding activity; GTPase activity; and translation initiation factor activity. Predicted to act upstream of or within translational initiation. Orthologous to human MTIF2 (mitochondrial translational initiation factor 2).

GO:

id name namespace
GO:0070124 mitochondrial translational initiation biological_process

KEGG:

id description
K02519 infB, MTIF2; translation initiation factor IF-2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_06889558_06901776.mRNA True 2948 mRNA 0.45 13 6889447 6902501

Neighbor

gene id symbol gene type direction distance location
CI01000024_06867041_06878399 NA coding downstream 10634 6867041 ~ 6878813 (-)
CI01000024_06451305_06495178 NA coding downstream 391017 6451112 ~ 6498430 (-)
CI01000024_05986174_06002425 NA coding downstream 886638 5985732 ~ 6002809 (-)
CI01000024_05879244_05880952 NA coding downstream 1008133 5878709 ~ 5881314 (-)
CI01000024_05749044_05807817 NA coding downstream 1081366 5748897 ~ 5808081 (-)
CI01000024_06909681_06921880 CCDC88AA coding upstream 6821 6909322 ~ 6921880 (-)
CI01000024_06944906_06955771 NA coding upstream 41461 6943962 ~ 6955771 (-)
CI01000024_06987928_07001260 CEP170L coding upstream 84955 6987456 ~ 7001358 (-)
CI01000024_07117698_07119483 NA coding upstream 214615 7117116 ~ 7120003 (-)
CI01000024_07131727_07169937 SEMA5BB coding upstream 228512 7131013 ~ 7169937 (-)
G125315 NA non-coding downstream 1290 6885162 ~ 6888157 (-)
G125348 NA non-coding downstream 7452 6881747 ~ 6881995 (-)
G125344 NA non-coding downstream 36552 6852600 ~ 6852895 (-)
G125312 NA non-coding downstream 112779 6776452 ~ 6776668 (-)
G125309 NA non-coding downstream 124556 6764188 ~ 6764891 (-)
G125355 NA non-coding upstream 62849 6965350 ~ 6965589 (-)
G125356 NA non-coding upstream 63284 6965785 ~ 6965996 (-)
G125318 NA non-coding upstream 81128 6983629 ~ 6985603 (-)
G125374 NA non-coding upstream 127189 7029690 ~ 7031113 (-)
G125379 NA non-coding upstream 139898 7042399 ~ 7042692 (-)
CI01000024_03938368_03941795 NA other downstream 2947523 3938315 ~ 3941924 (-)
G123233 NA other downstream 4334411 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 6062596 824968 ~ 838550 (-)
G125457 NA other upstream 454736 7357237 ~ 7358104 (-)
G125798 NA other upstream 1073166 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location