CI01000024_06944906_06955771


Basic Information

Item Value
gene id CI01000024_06944906_06955771
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 6943962 ~ 6955771 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_06944906_06955771.mRNA
TCCCAGCAGAAGTGTATTGCTGTGTTTGCACTGGTTTGCTGCTTTGCTGTTCTGGTGGCTCTAATTTTCTCTGCTGTGGATGTCTGGGGAGAGGATGAGGATGGTGTCACTGAGGAGAACTGCAGCAAAAATTGTCGCATTGTCCTTGTGGAAAACATCCCAGGGGAGCTGTCATTCAATAGTTCAACCCATGTCCCTCTTTCTGTGGGTCTCAACCACCTTTTGGACCAAGCAAAACTGTCAGTTGAGATAGTGTCCCCATACTGGGCTCTGACCTCCACCGATCAGGGGTCACGGCTTTATTCTGCCTATCAGGGTCAGTATTTGTTTCAGAGATTATTAAACCTGAAGTCTCGAGGTGTCAAATTAAAGATTGTCAGTGACCAGCCCAACTCCATTGAGCTAAAAAGCATGTCTGACCGCTATGCAGAAGTCCGCTATGTCAACATGACGGCCCTCACCAGAGGTAGACTGCTTTCCTGCTTTTGGGTAGTGGACAGGAAGCACATTTACATTGGCAGTGCTGGCATGAACTGGAAGGCTCTGTCCAAGCTGAAGGAGCTTGGGGTGATAGTGTATGACTGTAGTTGTCTGGCTCTGGACCTGCACAGGATCTTTTCTTTCTACTGGCAGCTGCAGTACAGAGACTACATCCCTTCAATCTGGTCCAAAAGAGTCACGGCCGTGTTCAGCAGAGACCAGCCACTCCAGCTCAGACTCAACGATACAGACGCTTCTGCCTATGTGTCGACGTCTCCAGATCTGTTTTGCCCCAAGGGTCGAAGCAGAGATATAGATGCTATACGACATGTGATTCGAGAAGCAAAGAGATTCATCTACATCTCTGTAACTGATTACCTGCCCTTAGTCAACCGCAGCTTCAGAGGATCACCAATTATAAGATACTGGTCGCCAATAGACGAGATGCTCAGGGAGGCTGTAGTATTGAGAGAGGTCAAAGTTCGTCTCTTAATCAGTCTCTGGACACGTACACATCCACTGACCTTTAACTTTATGACATCAATGCAAGCTCTATGCACAGGACTGCCAGTCTGCTCTATAGAGGTGAGATTTTACAGAGGCAAGGAGCAGATGGGAGGATTTCAGCACAGAATAAATGAGAATAAATTTATGGTGACAGACAACGCAGGATACATTGGGAATCTGGACTGGGTTGGCAGTGAGTTTGCCTTCAACGCAGGAGCCGGGCTGGTGATTCAGGAATCAGAGAACCAGCGGAAAGGGCAGGACTCAATTGTAGAGCAGCTGACTGCTGCTTTTGAAAGAGACTGGTTTTCACCCTACACAATAAGCCTGCTATCTGGCAGCACAACCCTTCAGGAGAGCCAACATGGGAGGCAGAAACTGCAATCTCTGAAGACAAAAGCAGAGAGCAGAGAGCATGAGTGAGCGGCGGGAATTTCTCTCTGAAGCGGGACCAATAAGCCAAGGACTTTGTGCCTCAGAACATCTGCGCCATGACTCTTAACATTTGAGTTTTCAAATGCTGTCAATGGAACTGAATTATAATCTCTGAAGGACTTCTGTGAAGGAAAAGATTTTTGTGTGCTTTCTTTTTAACATTATACAGTACAGCACTTTCAGTGAGAAACAGATTACTCTTTCACTAAATCTTTATATAATGCATGCCTATTTAGATGAGCAGAACTGTTGAAATTATTTACTCCAATATTCAAACTTTTCTTATTTTAAACCAAAATATTCCGAGGCTCATGGAAAACTGTCAAGAAAGGACATTAACAAAATTTTTTAATTGTGTTTTTCTCAAGATGTTCATCAGCCATCTTTTTTTAAAATCAAGCACATTTTTAGTAAAAGAAATTTTGAAAAAATCTGCATATATGCCAACACGTGTGCTGATTACATACGCAGCCTCATACTGTCATTGCTTTCTGGTCCACTAGATACTATGGCACATCTTACACTGTGTATATATACAAAATGTTTACATGATGCAGCATGCACAGCCTTGAAGAAATGTACAATCGTACGCACAAGAAGAGACTGTTTTTCTTATTGAATACTAAGTTAAGCTTACACCCTTTAAATGTAGCTTTATAGAGTAGCTTTTATATGTAGCTTTATATACTGTATTATCCTTTAATTGACTGTTTAATGGAACAGTAATGTTTTTATTAAACAGTCATGATTGTTGATCTTATAATACAGGCTATATATGTTGCATTGATTTCTCAGTAGTTTGTGGCCTGATGCTTTAGCATGTTTTGCCTTATATATGCTGCCATAAACTGTAGCTGCTGTTGCTTTCTGGATGACTACCTCTTATGATGCATCTTATGATATACTGTATACATATAGACATATATAATAAA

Function

NR:

description
unnamed protein product, partial

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K16861 PLD5; inactive phospholipase D5

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_06944906_06955771.mRNA True 2354 mRNA 0.42 9 6943962 6955771

Neighbor

gene id symbol gene type direction distance location
CI01000024_06909681_06921880 CCDC88AA coding downstream 22082 6909322 ~ 6921880 (-)
CI01000024_06889558_06901776 MTIF2 coding downstream 41461 6889447 ~ 6902501 (-)
CI01000024_06867041_06878399 NA coding downstream 65149 6867041 ~ 6878813 (-)
CI01000024_06451305_06495178 NA coding downstream 445532 6451112 ~ 6498430 (-)
CI01000024_05986174_06002425 NA coding downstream 941153 5985732 ~ 6002809 (-)
CI01000024_06987928_07001260 CEP170L coding upstream 31685 6987456 ~ 7001358 (-)
CI01000024_07117698_07119483 NA coding upstream 161345 7117116 ~ 7120003 (-)
CI01000024_07131727_07169937 SEMA5BB coding upstream 175242 7131013 ~ 7169937 (-)
CI01000024_07239312_07251354 DC1I2, DYNC1I2, DYNC1I2B coding upstream 281771 7237542 ~ 7251865 (-)
CI01000024_07293038_07298458 GORASP2 coding upstream 337078 7292849 ~ 7298458 (-)
G125315 NA non-coding downstream 55805 6885162 ~ 6888157 (-)
G125348 NA non-coding downstream 61967 6881747 ~ 6881995 (-)
G125344 NA non-coding downstream 91067 6852600 ~ 6852895 (-)
G125312 NA non-coding downstream 167294 6776452 ~ 6776668 (-)
G125309 NA non-coding downstream 179071 6764188 ~ 6764891 (-)
G125355 NA non-coding upstream 9579 6965350 ~ 6965589 (-)
G125356 NA non-coding upstream 10014 6965785 ~ 6965996 (-)
G125318 NA non-coding upstream 27858 6983629 ~ 6985603 (-)
G125374 NA non-coding upstream 73919 7029690 ~ 7031113 (-)
G125379 NA non-coding upstream 86628 7042399 ~ 7042692 (-)
CI01000024_03938368_03941795 NA other downstream 3002038 3938315 ~ 3941924 (-)
G123233 NA other downstream 4388926 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 6117111 824968 ~ 838550 (-)
G125457 NA other upstream 401466 7357237 ~ 7358104 (-)
G125798 NA other upstream 1019896 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location