CI01000024_07300290_07303945


Basic Information

Item Value
gene id CI01000024_07300290_07303945
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 7299343 ~ 7305514 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_07300290_07303945.mRNA
ATTTATTGGCCTATAGGTTCTATCAGCCACAGGGAGGCAGTGTAGTAACTGAAAACAATGTTGCACACATTTGACTTCCTCCAAGGGGCGATCGCGTGTGCACAAAGCTGAATCCCACATTACACCCTCGAGTTGTTCCAAACCTGTATGAATTTCTTCTGCTGAACACAAAAAAAGATATTTTGAAGAATATGGGTAAACAAACAGTTGATGGGCCCCACTGACTTCCATAATATGGAGAAATAAAATACAATGGAAGTCAATGGGGCCCATCGACTGTTTGGCTACCCATATTCTTCAAAATATCTTCATACAGGTTTGGAACAACTTGAGGGTGAGTAAATGACAGAATTTTCATTTTTGGGTGAACTCCTTTAAGACTCATTTAAATATCGGAACCATGGCTTTTTACCTTGCACTGGACCTTTTGCATTGCACTACATAGTTCAGTCCTTTAAATATAAGTTTAAAAGAAGATTACAAAATTTGTAAGGGGTAAAACGTGAGAACGTTGCTGTGTTCAACTGGACATGAATAATGATACTAAAAACTTTATTGTACAGATAGGCCTATTCGTTTTAATGTAAGAGTAAATTGAACGATAAGTTATTATTATTTAGTACACGCATTGGCATATATTGCTATTTATACATTTTTTTCTATGAAGTTTTATTTCCAAAATTCTCTATTTGACAACACTCTCAGAAAAAATGGCACAACAGCTGAGCTAATACTTATAAAGCCCCGGGTATACAGAAGAGTCCACTAGGTGGCAATACGCACAGTACTGAGCACAATGTGCAGTCGCCGAAGAAGAGTGTGTAAAGATTGATTCAAAAACAAGACGAGTAAAATCAGAAGTATGCCTTCTCCATCGTTTTTGATTCCTGTTCTCTTTGGTGTAACTTCTGAACTATGTTGCAATGGTGGATGGACTATTTTTCTTCCCCGATCCTGCCCAGCGAATGTCTTGTTGATGGCACGATGTCTGGTATAGAAAAAATTGTACTGCGCATGTGTCGAACTCGGTCATCCGCGCGCATCCGTGGTTTAGCGGACGCGACCGTGCGCGAGACGCGTCCGGGCGCGGAAAGTGAAGTATACCCGGGGCTTTAGGCTACCTCTCAAAGAACGTCACATGACCAAACCGGAAAACTGCTCTCACCACATCCGCTTGTGTTACAGCAGTGTGAACTGACCACGATATCTTTAGACTTATAACCTAGCTAGTTATTTTTATTGTTGGCTTTTTATTCAATTTAAATATTCAAATGTTTGTGAGAAGAAGAAAAAAAACTATCAATATTAATCTGCATATGCGGTGGACATCCGTTATGCTCATCTTTGGTAGCTCCTTTTGAAAGCATCTTAAGCAAAACAGCTCTATATTTCACGAGGTAACGTTACATACAAAAGACCTGAACCGGAAGCGATGCAACCTGTTTTAGAAAACGGAAGTTTGTTGTGCATAACAATGAACTTTAAAGTAATCTGCTAGCCTAGCTTATTCATTTTATGTTTACTTTACATTCTATTTTATTTTAATATCTGAATGTAATTGTGAGGAAAATGTCTTTGTCAAAACCAATAAAGTACCAGAAGCGGAATAATCCTAACAGTGATTTCTGCTGTGTACCTAAATGTGCGATATCAGGGAAGTTCAATTCCACCGTTAGTTTCCACCACTTCCCAAAGGATGAAACTTTAAGGAAAATATGGATACGTAATGTGAGACGTGAGAATTTGGTAATTAAGAGGACCACGACAGTCTGTAGTAGACATTTCGTTTCCACGGATGTCATTCAAGGTGGGCGGCGACGCTTAAAAGAGGGGGCTGTGCCAGTGTTGTTTGCCTGGAACGACTACTCTCTACCGGCAGCCAGCGTTTGGGAGAGAAGACCACGACCAGAGGATGGAGTAACTGAAAAGGAAAACATGGATGCTGAATTGTTGCTTCAGTGCCACGATTACGATGCAAAACCAGAACCATCAGCGTTGGATATAGCATATGAGAAAATAGAAGCTCAACAGCTGGTGATAGAAGAGCTGCGAAAGAGACTGGAAGAGGTTACACTGAAGCAGTCATTTGGCTTGGAGAGGTTTTCAGCATCGGACGATGACATTAGATTCTATACCAGATTTGCCAGCTACCGACATCTACAGGCATTTTGGAGGCAGATTGAACCTGCAACCAGGAGAATTGTGCGTGTTGGTACACAGCCATCCACTTCCAGCACAACTGCAGCTCCTGACAAGGCAGCTGATCCACCTTGTCAACCGCAAAGCCAGGCCATCTACAACAACAATTTGCGGAGTAGAAGGAAAAATCAGAGCCGATGTCTTCCACTAATCGATGAACTGTTCCTGTTCTTGGTGTACCTGTCGCTGGGTCTGAAGGAGAAAGATCTTGGTGATCGCTTTAACATTCATCAGTCTGCTGTCAGCAGGATAATCAAAAGTTGGGTCAATTTTTTGTACACCTTATTGGACGCTGTCAGAATATGGATGTCTCCTGAGGAAATTAGAGCCACGATGCCGAGTGTGTTCGGCAAGTACTCTGACACCCAAGTCATTATTGACTGTACAGAGCTGAGATGTCAGGTGCCTTCATCTTTACTCTTAAAGAGTGAGACGTTTTCTCAGTGTAAATCCCACACTACCCTGAAAGGAATGATCGGTGTGTCACCACATGGTGCTGTTACTTTTGTTTCCTCACTATATCCTGGCTCTGTCAGTAACAAAGAATTGTTCAGGCGATCTGGAATTGTCCCTCTTTTGGATAAAGACATGGCTGTAATGGTGGACGAGGGTTTTAGAATCGATGACCTAGTGCCCTGCAAAGTTTACAGACCACCTTTTCAGCTGTCTCATGATGAAGTACTGGTCACTCAGGACATTGCGCGGTTAAGGATACATGTGGAGAGGATAATTCAGCGCATCAAAGAGATCAAACTGTTTGACACTATTATCCCTCTGACCATTTCTGGCAGTATCAACCAGCTTTTTGAGGTAGCCTGCCTCCTAACAAACTATCAAAACAAGCCACTGTTCAAAACTTGGGCCAAAGAACTGACTATTTGTTAACCTCACTGAGAAACTGGATGCTTGTTTCAGATCTGCTCACCAAAATGACAGTGGGCCTCCCTCGGTTCTGGTTCTTAACACTACACAATGATTTCAAAAAGAACTGGATTCTCTGATGTCACAGATGTGATGCATATTTATGTAGCAATACAAGTTGTTCAAGCTGTTTGTCAAAGTTTTCATTAATTGTCTTTTATATCTAGTAGAATGTATAAAGACGGAAAACATCTTTTATACAGTCACAATGTGATAAATTTATTTGAAATTTTTCTCTTTGTTCATTGACCTTCTGCAGTCCATCATGTTTACAACTGTGACAATAAATGCTTATCAGGACCAACGAAATGCTGGATTTTCAAAGGTATGTGAAGTTCACAAGATACTCTTTAAAAGTCGTCTAAGAGTTTTACACACCGGTCTGTTATTGTAGGGACATTGACTTTACATTTTCATGCTCCTAAACTTAATGCTTAACAAAACTGGAACATATTGGGACTGTCTATGGGGAATTGATTGGATTGTTGTAGTGTGCTATTGCTGATCCCATGTGACAAACAAACACTGCTATATTTCTTTTAAAAAAAGGAATGGTTTATTTTGATTTCATGGTGCCTTTAATGCTATTCAGCAAATACATCCACCCCTTATCAACCTAAAAATATTTTGAGAGGTGGGGGCACCAAAAAGACTTATGTATTATTTTCATTAGCAGAGAGAGCGAGTGGGGCACTTTTAAAGACTGTCCTAAAAGGTGTCCGATAACTCGAGAACAGCCGCACGTGAACGAATCTTTCAGACTGGCTAGTGAACCGTTCAACTGATTAATCGAAAAGATCCGATTCAAACGAATGATTCGCTCAGGAATCCGACATCGCTTCCGTGTATTCAAGCGCTATGGTTGCATATCCCATCGTTTACCTACTTTACACTTACAAATGAGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_07300290_07303945.mRNA True 4031 mRNA 0.41 4 7299343 7305514

Neighbor

gene id symbol gene type direction distance location
CI01000024_07293038_07298458 GORASP2 coding downstream 885 7292849 ~ 7298458 (-)
CI01000024_07239312_07251354 DC1I2, DYNC1I2, DYNC1I2B coding downstream 47478 7237542 ~ 7251865 (-)
CI01000024_07131727_07169937 SEMA5BB coding downstream 129406 7131013 ~ 7169937 (-)
CI01000024_07117698_07119483 NA coding downstream 179340 7117116 ~ 7120003 (-)
CI01000024_06987928_07001260 CEP170L coding downstream 297985 6987456 ~ 7001358 (-)
CI01000024_07308822_07327683 GAD1B, GAD1, GAD1A coding upstream 871 7306385 ~ 7327683 (-)
CI01000024_07340241_07341456 NA coding upstream 34260 7339774 ~ 7341516 (-)
CI01000024_07402113_07409179 SSB coding upstream 95646 7401160 ~ 7409795 (-)
CI01000024_07413462_07414187 PHOSPHO2 coding upstream 107572 7413086 ~ 7414187 (-)
CI01000024_07415578_07421136 PPIG coding upstream 110031 7415545 ~ 7421136 (-)
G125386 NA non-coding downstream 12407 7284938 ~ 7286936 (-)
G125389 NA non-coding downstream 169339 7128822 ~ 7130004 (-)
G125385 NA non-coding downstream 184457 7113143 ~ 7114886 (-)
G125425 NA non-coding downstream 197423 7101685 ~ 7101920 (-)
G125379 NA non-coding downstream 256651 7042399 ~ 7042692 (-)
G125459 NA non-coding upstream 71520 7377034 ~ 7377263 (-)
G125476 NA non-coding upstream 131437 7436951 ~ 7437358 (-)
G125523 NA non-coding upstream 207364 7512878 ~ 7513128 (-)
G125716 NA non-coding upstream 208136 7513650 ~ 7513971 (-)
G125725 NA non-coding upstream 208790 7514304 ~ 7545425 (-)
CI01000024_03938368_03941795 NA other downstream 3357419 3938315 ~ 3941924 (-)
G123233 NA other downstream 4744307 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 6472492 824968 ~ 838550 (-)
G125457 NA other upstream 51723 7357237 ~ 7358104 (-)
G125798 NA other upstream 670153 7975667 ~ 7976047 (-)

Expression


Co-expression Network