CI01000024_08450580_08455758


Basic Information

Item Value
gene id CI01000024_08450580_08455758
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 8450562 ~ 8457764 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_08450580_08455758.mRNA
ATCCTCCACATCATGTTGGAGGGAAATCAACATGACAGACTTAAGCAAATGAAATCCGTAATGTTAGGTTTGTGTCACTGCCATTGTATAAACAATCAATTTTTAATGAATAAAGTGTCTGAGCTTGATATTTTTACCTCAATGAAAGTCAGTCAGTTCACACAGCTGTCCTGGCAGTGCACTGGTGTTGAAACATAAAGTCACAATAATTTTACCTTTAATGCAGCAATGGCCAGATTCACACTGTCATTTGTCCATGTGTCCACTGCAGCCTGCAACGAAACAGCACAGCTCTAGCACCGTCTGCATCTGTCCTACTAACCAGACTTTCATCAGACAACTCCACTTACTGTCTCTGGTTAACAGCTGCCTGACATATGTGACGCCTTTACATCACTATTCTCCAAGGACTCAAGAATTCCTTGCACAATGTCTTTGCATCTCACTGTGGAATATTTGTGAGAGTGTAATGTGAGTATTCCAAGGAAGCATTCTGCCAATTTTTTATCCATTCTTGTTATATTTACACTTAAAACCAAATAATTTTCCAAACATGCAGAAATCAAACATAAACAAATGTCAATAAACATTTAAATCTTAACAATGAATAATGAAGTGAGACGAATTCATGTGATTAAGACATTATATTATATTATATTATATTATATAAAACGGTTAGTTCTTGTCCTTGATTCTGATTGGTCAATAGCTGTGTTTTATTCACCATAAAACACGGCTATGACCGCTTCACCCAATGGTTCTGTGTATCATTACACAACACCCTTAACAACCACTCTTAGCAACGTAAACTGTTTGTTCTCAGTTGATATTGTTAATTGAAGTTTACTGTATTATGTAGAAGAGTACTGTGAGAAAGAGAGATTGAGTGAGCGAGTTTATTACCTGAATTCAGATTTAGCATTTTCCTTCAGGTTAGTCTTATGTTCATAATAAAAAAAATCTATTTAAATGTCCGCTGCAATATCTTGTCCTTTTAACAGTTAAGGGGTTTTCCTCTGACTGACAGCGCTAGTCAAAGCATTTGTCAGTTGCGTCTTGTTCCGTGTTCACAACAATTCAGTCTTTTCAATATAAAAGTCTTTGCTACTGACTAACACACTCGTAAAGACACTCTTTGCTGCCATCTAATGGTGTAATAATGTAACTTCCGTTGCTGTTTCACGATCAGGGATTATTTTTTCCGGCGAAAGGAAGGCTTTTAGTGATTTTACTTCATGAAAGCTGCATTGATACATATATTTTTTGGCTTTAATAATTGTATTGTGTGGTAACCGTTTTATAAAAGCAATAAGGTACTCGAGGCTGGTGCTGTATCATGAATAAATCACGGCAGAAGGGATTGCTTCGCGTCGTGCCTAACAACGCCCTTCAGCCGTGACTTATTCATGATACAGCACAGCCTCTCGTACCTTATTGCTGACATATTGCAAACAATAAGAAAGCATATTTAGCTTAAATAAAATGAAGCACTACCTTTAAGATTTTGTATATTGTGACAATAATTAAGCATAAGCATTGTCATTATTCTCATATTTATTAATATTTCTATATTTATTAATTAATATTTATTATAATATTCACCCACAATGCATTACAGCTGGACTGTTCCCGGCAGACTGTATGGTTATTGTACAGTGGAAACATCTCTTTTGTTTCATATCTGTTTCATATCTTTTATTAGTTTTATTTTTAAGTATTTTTATTAAGCTTATTTTATTTCAGTTCTAGTTTTAGACTTTGTGATTTTCTACTTATTTTATTTCAGTTAGTTGCCAAGCCAGTAGTGCTAATTTTTGTTTAGCTCAGTGTTCTTTCATTACCCTTTCTCTCACATTAGCAGCGTGAGGCCTGAGGTTTTGTCACATTTCAGAATAGTCTGTCACCCCATACACCCCCACCCCACCCCACGCGCGCACACACACACAGTCACCAATACGCTACATTTACCACAACCACCAAAAAAACTACTGCAATTCACTCTAAAGATGAGCAGTGCTAATGTTAGCGGAGAGAATCGCACGTGTTCGCGGGCGCGGGAAGCTGTTGGCCGTGTGAAGTCGTTGTTTGCGGCCGGTGCGGCACTCCAAGCAGCTGTGGGTGAAGAAGATGCTCAGATTTGCTTTCACACAGCCCGGAGCGCATCAGAGAGGAAGACGGCGATGTCAGACCTGCCTTCGTCACGTCACCGCCAGCAGTCCTCATCATACCCTCTCATACGGACCCCCCTGCTCGCACGCACGCGGTTCGTGAAGAAGCGCCACAGGAGTGCGCGGTTAAGAATAGCAGAAGTCATGTCGCATCAGATGCAAGTGCTCGGCGTGTTTTGGGGGCTGTTTCGTTGCGGCACAGAACTCGCGCGAGTCTCCCCTCCTGCAGTGATTATCTGCTGCCGTTTGCATGCTGTCACTCTTCTTTGGCGCTCTGCGCGGGAGCTTTGGCCCTCAGCAGGGGTCAGTGTTGCTGTGAAAACTGATACACTGGAATTCAATCTGGAAATTGAGGACAGTGGCCAACAGTACCGGATCAACCATGAGAATAATGGAGCTGCAGTCCAGATCTCTGTTTATTTGTGTTCAGTCAGGGGCCACGGCCCTCAACCAACTCCATCCTCTCAGACCAACGCTGGGTCACTGTTTGTTCAGACACCGGCCTGATATGATTGAAGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_08450580_08455758.mRNA True 2693 mRNA 0.41 3 8450562 8457764

Neighbor

gene id symbol gene type direction distance location
CI01000024_08292984_08380058 PBX1.S, PBX1A, PBX1B, PBX1 coding downstream 70504 8292984 ~ 8380058 (-)
CI01000024_08260814_08264845 SZT2 coding downstream 185717 8260814 ~ 8264845 (-)
CI01000024_08161023_08259943 SZT2 coding downstream 190619 8160290 ~ 8259943 (-)
CI01000024_07858315_07901816 NA coding downstream 548624 7858157 ~ 7901938 (-)
CI01000024_07847824_07855700 NA coding downstream 594221 7847573 ~ 7856341 (-)
CI01000024_08460577_08479254 NA coding upstream 2705 8460469 ~ 8479690 (-)
CI01000024_08500620_08512420 ACV1B, ACVR1BA, ACVR1BB, ACVR1B coding upstream 42058 8499822 ~ 8512420 (-)
CI01000024_08604727_08620689 TGM2B coding upstream 146023 8603787 ~ 8620724 (-)
CI01000024_08632171_08642748 QUO coding upstream 174168 8631932 ~ 8642748 (-)
G126187 NA non-coding downstream 16866 8433479 ~ 8433696 (-)
G126179 NA non-coding downstream 30035 8420163 ~ 8420527 (-)
G126172 NA non-coding downstream 44574 8405522 ~ 8405988 (-)
G126163 NA non-coding downstream 58985 8391374 ~ 8391577 (-)
G126097 NA non-coding downstream 82770 8352657 ~ 8367792 (-)
G126210 NA non-coding upstream 54946 8512710 ~ 8607995 (-)
G126233 NA non-coding upstream 127292 8585056 ~ 8599810 (-)
G125798 NA other downstream 474515 7975667 ~ 7976047 (-)
G125457 NA other downstream 1092458 7357237 ~ 7358104 (-)
CI01000024_03938368_03941795 NA other downstream 4508638 3938315 ~ 3941924 (-)
G123233 NA other downstream 5895526 2547460 ~ 2555036 (-)
CI01000024_00825386_00837898 NA other downstream 7623711 824968 ~ 838550 (-)

Expression


Co-expression Network