G123233


Basic Information

Item Value
gene id G123233
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 2547460 ~ 2555036 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU139935
TTTGGTCAAGTACCTTTATTAAATGTGCACAAAAAGGCAGATTACAAGTTGTACTGAAAAGCATCCAGGAATGGCTCATGAGCCATTAAAACCAGTGTGTTGAAAAATCATTAAAACATATTACAGTTATTGAAATAATAAATGCTACAATACAACATAAATCACAATGCAATATTCTCTCCTCGGTCATACTTCATTTAAAATGTCATACTCAGTTTCCCTTCTTTCTGCCTGACAACAAGCTAGTGTTTTATTGTAACTGTCAATGAGAAATAAACAGTTGCAATTAATTGTCTAAAATAATAAAGCTACAAAAGCTCCAACACATTCAATACATGAGTTGATAATCATTTGTTGTCAATTTGTGAAGAAATATTTCATACACAAAACACATTAGCACAAGAAACATCTTAATATGCTAGGTTCATGACCTGTACAGCTGTGCTTCCAGCATTGGCCTCGGTAAGGTAAGCCGTAACCTGAGACATATCTTCGATGTTTTTGGGTACTACATTCTTACACATGAAAACATTGAATGGAAAAAGCATCACAATGGACAGCATGCAAATGTGACTAGCAATAATACATTAAATAAGTACAGTGCATCAAAACAGCATACGACCTTAGAGGCCTCAGTCGCTCCCTCAAAAAACTCTTTGCAACACACTGGTGCACTTTCTGAATCGTAGAATATATATAGTGCTTAGCTTAATAGCTTGTGATAACAGTGCTCCGTTTTTCCACAATTTATTTTATAACTGTTTATGACACTGTGTGGCAGTTCCTTGCGTTACATTTGTAGAACTGAATTGAAGAACAAAAATTGATTCCAAGCAAGCCAAGAGAGCCAAACTGATCACATTTAAACAGTTTTGCAGACTCACTATAAGAGCATTGTGGGTACAAGCATTGTGCACACAGGGCAACAAATGTTTAAAAATACATAGATATATATATTATATACATACTTTTACAATGTACTTTTGAAGGTAAACAAATAAGTTCTTTCAAAGAAGTTTGTAAAAACATTGTACAGTGTGGTTGTGAAATTGTGTACAAACGAACTGCTGACAAAATGCTGGATACAGCACAGCCACAGGAATCGACTTTGAGCTACGGCAGGTAAGACAGGCATTTTTGTTTTATTCATTCTTCCTGATGTTTATATTATAAGGCAATTTGATCAAAACCATTTTCAGACATCAAAAAGCTACAGCTACACACAGGTTATTCAGTTAGTGTTTCGTTTGCGGTCTCTCTTCCCTCATATGTCGATTTGGCTTCTTGTCGGGCTTCTTGTCTCGAACCTTCCGCAGTCTCCGTGGTGGAGGGGTAGATTTGGACTCACTGGACGTGTCCCCTGCATCCCTGTCCTCTGGGATGTTGGGAATGGCTGCACTACTGCCTTCCAGGGTGTTCCTCAGGGACGAGTCCTCAGGACTCCCAATTTCACTGCTGCTCAAGTCCTGCTCCTGATTTCCGCTTATTTTAGCCAAGCTTGCGCTCGAGGGTTCCTCGCTTTTTCTCAGAGGCTGCTGCAGCTCGTTCATGTCCACTCCAGAGTCCAAGCTTGTGTCGTTGCTGCTGCCCGGACGATGTCTTCCCTGAAGCTCAATCACAGAGTGACGAACCTGGGCTGCTGGTTTACCGTCAAGAGACACAAACCAAGCCCGGGGCGGGTGAATGGACGGCTTGCCCTTGGAGAGCTCAAGCAAGGTTTGCTCTGATATTCCCTGGAGTTCCCCCCGAAAAGGCCCCATTCCAGCCGCTTCGTTCAAAGTTCCTGGGACAGATACGGATTCCAGGAGATGACTGTAGCGGCCCCATAGCCCTGGGTTAGCGGCAGCAGCCTGCACTCCTTCCAGAGCCTGCTGCTCATCGCTGTCTTGCTGGGGAACTTTAGGCAACGTCTGAGTGAAACTGTCTTTTAAGTTGCGCTCAGTCTGAGCTCCATGTTCCATGCCATTCCGTGGAAAAGTGGCAGATCTGCTTCCAGAAGGGTCAGCTTGTCCCTGGGAATTAAACAGCTCTGGGGCCTGTACAATAGCCACAGGCTGGTTGTAGATGTGGAACAGCTTGTCCTTGAAAACTAAATTCTCTGCACCACCCTGGCGTGAGCCATTCTGTTCCGATTTTTCCCAAAGCTTTGCCACTTCATCACTATTAATGTAGAGATTAGACACTGGGGCTCTTAGGCTTTCTAATCCCACAGCTCCAATGTTCTCGTACAGATTGCCCACCGGCCTTCCAACATTCTCCACATAAATGTTGTAGTTGGCTTGGTGTCGTGGAGAGTCTGATGCATCATGGCCGATGCCTCTTGCAGCCAGTGAATAGGACCGGTCCCCATTATGAAAGAAAAGTTCTTGAGCCTCATCAGAGCTGGTGGAAGTGGTCTGGTCTTTCTTCAATACGGTGAGCCTGGTGGAATTCCATCGCTTTCTTCCGACCTCATGGTTTAAATCTCTGCAGTGAAATACAATCACAGATAAAAATCCAATGACTATCACAAGAGTTCCTCCCAAGATACCCACAAGAAGGTATGTGTGGTAGGAAATGAAATCCATTGAGCTTGCAAGCCCCATATAACCTGATGATGGTGGTGGTGCAGCAATCCAGTTACCAAGTTGAGGTGCTACATAAGTCCAGACTAGGCCATTTTTCTCCATCTGAATAGTGCCTATACCTTTATTTACCCAGGTACCTATTGTCATGTCAAAGGTCCACGCAGGAAGTGAGTCGGAGGGTCGTAGGTGAGTGTGGTAGGGAAGTGGTACTGTTAGCTTAATGGGTCCTTTGACATCAACCTCCTTTCCCTTAGACACTAACTGGGCACTGATCATAGCCAAGGGGCTTAACTTGACATTCCTATAACCTCCTTTACCGTTGATGTTTAGAGTAAAGAAATTTGAGTCTTTTTCTGTAGGCAGGGCTGGAGCTGTCAGATAGGCTGACAACATGGAGATGGTAGTGTTTTCAGACAGTTTGAGGAGACTTTTGGGAAACTGGACACTCGGTTGAAATGACAGATCAGATGTTTTTCGAGTTATCAGCACAGTATCCTCAAAGAGCCAGATGTTCCCTTGTGTTTGAGGGCGTAGGGACATCGTAATGACAGAAAAAATGGGCATCTTGGTGGTTTTCCAAGGCAGCTGGGTGAGCACATAACCCTCCATGCTGGCCACCAGAGTGAGGGTCAAGCCAAGGTGGTATGGGATAGTGACCGTGACCTCTCCATTCTCCAGAGTCTGGTTGGAGTGAATCTGGGATCCATTCAAGAACACACCCACCACAGCTCCTTTCAGGAACCTCTGGCTAGACGCATCTTTAACCAAAATCTTTAGTGTCAGGAGCGACTCTTGATGGCGGCACCGTCGCATCCCCCTGTCCCTTGAGCGGGGACGTCTGTGTGTCGCTGGCATTGTCCTCCTCCGAAAGCGAGGCGAGGCCGTGGGAGAGCACCCCACCCTCCGCTCTCCTCACGTACCCATCCTCGCAGAAAATCAGCAGCGCGGCGAGGAGCAGACACCCCGAAAGATCTGACATGGCGTCTCAGACATAACTGCACTCAATGACACGGAGAAGGAGAATGTTGTTGTTTTTCTGTCCTCGGGTGAATGTGTATGTCACGGTCACATCATGCTTCTCGGGTGGACCGATGTATATCTGAGGGAGCTGGTGCTGGAGTCAGACGGGTGCGCGTGTTGCGTCATAGCTCACGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139935 True 3723 TUCP 0.46 8 2547460 2555036

Neighbor

gene id symbol gene type direction distance location
CI01000024_02484606_02498687 NA coding downstream 48274 2475874 ~ 2503657 (-)
CI01000024_02421600_02456292 BAZ2B coding downstream 91168 2421600 ~ 2456292 (-)
CI01000024_02402657_02417463 WDSUB1 coding downstream 129399 2402413 ~ 2418061 (-)
CI01000024_02249593_02250941 NA coding downstream 296366 2249593 ~ 2251094 (-)
CI01000024_02170481_02175158 NR4A2, NR4A2A, NR4A2B coding downstream 372302 2169743 ~ 2175158 (-)
CI01000024_02555602_02562403 ZSWIM2 coding upstream 247 2555283 ~ 2562932 (-)
CI01000024_02597194_02605289 NA coding upstream 41715 2596751 ~ 2605289 (-)
CI01000024_02659912_02681156 NA coding upstream 104624 2659660 ~ 2684099 (-)
CI01000024_02712596_02739960 COL5A2, COL5A2B coding upstream 156837 2711873 ~ 2739960 (-)
CI01000024_02761265_02771248 NA coding upstream 205816 2760852 ~ 2771248 (-)
G123225 NA non-coding downstream 5357 2539014 ~ 2542103 (-)
G123229 NA non-coding downstream 9376 2535337 ~ 2538084 (-)
G123232 NA non-coding downstream 17154 2530051 ~ 2530306 (-)
G123230 NA non-coding downstream 18241 2528288 ~ 2529219 (-)
G123223 NA non-coding downstream 23499 2523688 ~ 2523961 (-)
G123235 NA non-coding upstream 1518 2556554 ~ 2556784 (-)
G123247 NA non-coding upstream 25129 2580165 ~ 2580507 (-)
G123256 NA non-coding upstream 69559 2624595 ~ 2624835 (-)
G123324 NA non-coding upstream 223422 2778458 ~ 2779425 (-)
CI01000024_00825386_00837898 NA other downstream 1720609 824968 ~ 838550 (-)
CI01000024_03938368_03941795 NA other upstream 1381006 3938315 ~ 3941924 (-)
G125457 NA other upstream 4802201 7357237 ~ 7358104 (-)
G125798 NA other upstream 5420631 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location